Pairwise Alignments

Query, 444 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 463 a.a., sigma-54-dependent Fis family transcriptional regulator from Magnetospirillum magneticum AMB-1

 Score =  186 bits (471), Expect = 2e-51
 Identities = 118/375 (31%), Positives = 194/375 (51%), Gaps = 28/375 (7%)

Query: 94  DTICQFIVNFCIDFFTAPIPDAQLLSTIGHQLGMLKLEKK---VWPHFGSAGNMGLIGES 150
           +T  Q I     DF   P    +LL  +   +   +L ++   +    GS G   L+G +
Sbjct: 89  ETAVQAIKQGAYDFIEKPFKADRLLLVVERAVEAARLRRENEELRLRSGSGGE--LVGNA 146

Query: 151 MPMKRLRDQIKRIGPTDVSILIYGESGTGKETVAKAIHKTSSRAQKPFISVNCRAMSEKR 210
           + + ++R  ++++GPT+  +LI G +G+GKE VA+ IH  S RA  PF+ +NC AM   R
Sbjct: 147 VGILQVRQAVEKVGPTNSRVLITGPAGSGKEVVARQIHARSRRADGPFVVLNCAAMHPDR 206

Query: 211 LESELFGLGETEEGQQP-----FLLQADGGTLLLNDILTLPKSQQLNLLRFLQEGTVETR 265
           +E ELFG     +G           QA GGTLLL+++  +P   Q  ++R LQ+   E  
Sbjct: 207 MEMELFGTEHGLDGPDSPRKVGTFEQAHGGTLLLDEVADMPLETQGKIVRVLQDQMFERI 266

Query: 266 QGVRAV--DVRILAANSSDIEKALIDGDFNEELYHYINVLRINVPSLKERASDIVLLAKH 323
            G + V  DVR++A+ + D++  +  G F E+LY+ +NV+ + +PSL++R  DI LLA+H
Sbjct: 267 GGGKRVEVDVRVIASTNRDLQSEMTAGHFREDLYYRLNVVPVKMPSLRDRREDIPLLARH 326

Query: 324 FLQEYSKEYNAQARSFSDDAVRGLTRYHWPGNVRELMNQIKRVVLMSDTVVLDESQLDLP 383
           F+   +     Q R   +DA+  L  Y WPGNVR+L N +  +++M+     +  + D+ 
Sbjct: 327 FMTMAAAAAGVQPRMVGEDAMAALQAYDWPGNVRQLRNVMDWLLIMAPGDQREAIRADML 386

Query: 384 KRSDGRRS----------------LKSIRERSERDALLLVLESHSGQVSTAAKELGVSRA 427
               G  +                L+  RE  ER+ LL  +   +G +S  A  +G+ R+
Sbjct: 387 PGEIGAITPAVLRWEKSSEIMTLPLREARELFEREYLLAQVNRFAGNISRTAAFVGMERS 446

Query: 428 TMYRLLNKHNLITDE 442
            ++R L    + TDE
Sbjct: 447 ALHRKLKLLGVNTDE 461