Pairwise Alignments

Query, 444 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., Putative sensory histidine kinase YfhA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  202 bits (514), Expect = 2e-56
 Identities = 121/341 (35%), Positives = 191/341 (56%), Gaps = 15/341 (4%)

Query: 107 FFTAPIPDAQLLSTIGHQLGMLKLEKKVWPHFGSAGNMGLIGESMPMKRLRDQIKRIGPT 166
           F T PI    L   I   L      ++  P    +    ++  S  M RL +Q + +  +
Sbjct: 104 FLTKPIDRDALYKAIDEAL------EQSAPATDDSWRNAIVTRSPLMLRLLEQARMVAQS 157

Query: 167 DVSILIYGESGTGKETVAKAIHKTSSRAQKPFISVNCRAMSEKRLESELFGLGE-----T 221
           DVS+LI G+SGTGKE  A+AIH  S R+ KPF+++NC A+ E+ LESELFG         
Sbjct: 158 DVSVLINGQSGTGKEIFAQAIHNASPRSNKPFVAINCGALPEQLLESELFGHARGAFTGA 217

Query: 222 EEGQQPFLLQADGGTLLLNDILTLPKSQQLNLLRFLQEGTVETRQGVRAVD--VRILAAN 279
              ++     A+GGTL L++I  +P   Q+ LLR LQE  V      R +D  VRI++A 
Sbjct: 218 VSNREGLFQAAEGGTLFLDEIGDMPAPLQVKLLRVLQERKVRPLGSNRDIDIDVRIISAT 277

Query: 280 SSDIEKALIDGDFNEELYHYINVLRINVPSLKERASDIVLLAKHFLQEYSKEYNAQARSF 339
             D+ KA+  G+F E+LY+ +NV+ + +P+L ER  DI LLA H L++ ++ +    R+F
Sbjct: 278 HRDLPKAMARGEFREDLYYRLNVVSLKIPALAERTEDIPLLANHLLRQSAQRHKPFVRAF 337

Query: 340 SDDAVRGLTRYHWPGNVRELMNQIKRVVLMSDTVVLDESQLD--LPKRSDGRRSLKSIRE 397
           S DA++ L    WPGNVR+L+N I++ V ++ + V+ ++ ++  L   +    +    R 
Sbjct: 338 STDAMKRLMTASWPGNVRQLVNVIEQCVALTSSPVISDALVEQALEGENTALPTFAEARN 397

Query: 398 RSERDALLLVLESHSGQVSTAAKELGVSRATMYRLLNKHNL 438
           + E + L  +L+   G V+ AA+  G +R   Y+LL++H L
Sbjct: 398 QFELNYLRKLLQITKGNVTHAARMAGRNRTEFYKLLSRHEL 438