Pairwise Alignments

Query, 444 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Enterobacter asburiae PDN3

 Score =  196 bits (498), Expect = 1e-54
 Identities = 119/341 (34%), Positives = 188/341 (55%), Gaps = 15/341 (4%)

Query: 107 FFTAPIPDAQLLSTIGHQLGMLKLEKKVWPHFGSAGNMGLIGESMPMKRLRDQIKRIGPT 166
           F T P+    L   I   L      +   P    A    ++  S  M RL +Q + +  +
Sbjct: 104 FLTKPVDKDALYKAIDSAL------EHAAPAGDEAWRESIVTRSPIMLRLLEQARMVAQS 157

Query: 167 DVSILIYGESGTGKETVAKAIHKTSSRAQKPFISVNCRAMSEKRLESELFGLGE-----T 221
           DVS+LI G+SGTGKE +A+AIH  S R++  FI++NC A+ E+ LESELFG         
Sbjct: 158 DVSVLINGQSGTGKEILAQAIHNASPRSKNAFIAINCGALPEQLLESELFGHARGAFTGA 217

Query: 222 EEGQQPFLLQADGGTLLLNDILTLPKSQQLNLLRFLQEGTVETRQGVRAVD--VRILAAN 279
              ++     A+GGTL L++I  +P   Q+ LLR LQE  V      R +D  VRI++A 
Sbjct: 218 VSSREGLFQAAEGGTLFLDEIGDMPAPLQVKLLRVLQERKVRPLGSNRDIDINVRIISAT 277

Query: 280 SSDIEKALIDGDFNEELYHYINVLRINVPSLKERASDIVLLAKHFLQEYSKEYNAQARSF 339
             D+ K +   +F E+LY+ +NV+ + +P+L ERA DI LLA H L++ +  +    R+F
Sbjct: 278 HRDLPKVMARNEFREDLYYRLNVVNLKIPALAERAEDIPLLANHLLRQAADRHKPFVRAF 337

Query: 340 SDDAVRGLTRYHWPGNVRELMNQIKRVVLMSDTVVLDESQLD--LPKRSDGRRSLKSIRE 397
           S DA++ L    WPGNVR+L+N I++ V ++ + V+ ++ ++  L   +    +    R 
Sbjct: 338 STDAMKRLMAAGWPGNVRQLVNVIEQCVALTSSPVISDALVEQALEGENTALPTFAEARN 397

Query: 398 RSERDALLLVLESHSGQVSTAAKELGVSRATMYRLLNKHNL 438
           + E + L  +L+   G V+ AA+  G +R   Y+LL++H L
Sbjct: 398 QFELNYLRKLLQITKGNVTHAARMAGRNRTEFYKLLSRHEL 438