Pairwise Alignments

Query, 444 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., Transcriptional regulatory protein ZraR from Escherichia fergusonii Becca

 Score =  207 bits (526), Expect = 7e-58
 Identities = 130/387 (33%), Positives = 218/387 (56%), Gaps = 25/387 (6%)

Query: 67  LNGIANLVSSHKQVRWL-----AFIREAQLSSDTICQFIVNFCIDFFTAPIPDAQLLSTI 121
           ++GIA L    K+++ L       I  A  S +T  + +    +D+   P+    L +T+
Sbjct: 62  MDGIATL----KEIKTLNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATL 117

Query: 122 GHQLGMLKLEKKVWPHFGSAGNMGLIGESMPMKRLRDQIKRIGPTDVSILIYGESGTGKE 181
              L          P   SA   G++G+S  M+ L  +I  + P++ ++LI+G+SGTGKE
Sbjct: 118 EKALAHTHSVDAETPAV-SASQFGMVGKSPAMQHLLSEIALVAPSEATVLIHGDSGTGKE 176

Query: 182 TVAKAIHKTSSRAQKPFISVNCRAMSEKRLESELFGLGE-----TEEGQQPFLLQADGGT 236
            VA+AIH +S+R++KP +++NC A++E  LESELFG  +      ++ ++   ++ADGGT
Sbjct: 177 LVARAIHASSARSEKPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGT 236

Query: 237 LLLNDILTLPKSQQLNLLRFLQEGTVETRQGVR---AVDVRILAANSSDIEKALIDGDFN 293
           L L++I  +    Q+ LLR +QE  V+ R G     +VDVR++AA   D+   +  G F 
Sbjct: 237 LFLDEIGDISPMMQVRLLRAIQEREVQ-RVGSNQTISVDVRLIAATHRDLAAEVNAGRFR 295

Query: 294 EELYHYINVLRINVPSLKERASDIVLLAKHFLQEYSKEYNAQARSFSDDAVRGLTRYHWP 353
           ++LY+ +NV+ I VPSL++R  DI LLA HFLQ +++      + F+  A+  L  Y WP
Sbjct: 296 QDLYYRLNVVAIEVPSLRQRREDIPLLAGHFLQRFAERNRKAVKGFTPQAMDLLIHYDWP 355

Query: 354 GNVRELMNQIKRVVLMSDTVVLDESQLDLPKRSD-----GRRSLKSIRERSERDALLLVL 408
           GN+REL N ++R V++     + E +L L   S        + ++ + E  E++ +L  L
Sbjct: 356 GNIRELENAVERAVVLLTGEYISERELPLAIASTPIPLVQSQDIQPLVE-VEKEVILAAL 414

Query: 409 ESHSGQVSTAAKELGVSRATMYRLLNK 435
           E   G  + AA++LG++R T+   L++
Sbjct: 415 EKTGGNKTEAARQLGITRKTLLAKLSR 441