Pairwise Alignments

Query, 444 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., sigma-54 dependent transcriptional regulator from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  186 bits (473), Expect = 1e-51
 Identities = 121/377 (32%), Positives = 190/377 (50%), Gaps = 45/377 (11%)

Query: 106 DFFTAPIPDAQLLSTIGHQLGMLKLEKKVWPHF----GSAGNMGLIGESMPMKRLRDQIK 161
           DFF  P+   +LL  + + + M +L  +V        G      ++G+S PM+ ++    
Sbjct: 100 DFFVKPVGPERLLVGVRNAMQMKRLTAEVGRLTKRVQGRTSFDDIVGDSPPMRMVKALGA 159

Query: 162 RIGPTDVSILIYGESGTGKETVAKAIHKTSSRAQKPFISVNCRAMSEKRLESELFG---- 217
           R   + + +LI GESG GKE +A+A+H  S RA KPF++VNC A+    +ES LFG    
Sbjct: 160 RAAKSSIPVLITGESGVGKEVIARALHGASDRAGKPFVAVNCGALPANLIESILFGHEKG 219

Query: 218 --LGETEEGQQPFLLQADGGTLLLNDILTLPKSQQLNLLRFLQEGTVETRQGVRAV--DV 273
              G  ++    F  +ADGGTL L++I  LP   Q+ LLR LQEG ++   G R V  DV
Sbjct: 220 AFTGAVDKTLGKFR-EADGGTLFLDEIGELPLDMQVKLLRALQEGEIDPVGGKRPVKIDV 278

Query: 274 RILAANSSDIEKALIDGDFNEELYHYINVLRINVPSLKERASDIVLLAKHFLQEYSKEYN 333
           RI++A + D  + + DG F E+L++ +NV  I  PSL++R  DI  L  HF+  ++ E  
Sbjct: 279 RIVSATNRDPAQQVKDGAFREDLFYRLNVFPIEAPSLRDRREDIAPLVDHFIARFNAEEG 338

Query: 334 AQARSFSDDAVRGLTRYHWPGNVRELMNQIKRVVLMSDTVVLD----------------- 376
            +    + + +  L  + WPGNVR+L N + R ++++D   L                  
Sbjct: 339 KRIAGCAPETLALLQGFDWPGNVRQLENAVFRAIVLADAPFLQPHDFPAISGVAAPMPDA 398

Query: 377 ---------------ESQLDLPKRSDGRRSLKSIRERSERDALLLVLESHSGQVSTAAKE 421
                           +Q+D P R    R      E  ERD +   +E ++G +S  A+ 
Sbjct: 399 QPLQVATAAGAQTDAAAQVDQPIRILDERGHLRTLEDIERDLIQHAIEVYAGHMSEIARR 458

Query: 422 LGVSRATMYRLLNKHNL 438
           LG+ R+T+YR + +  L
Sbjct: 459 LGIGRSTLYRKVREQGL 475