Pairwise Alignments

Query, 444 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., Transcriptional regulatory protein ZraR from Alteromonas macleodii MIT1002

 Score =  205 bits (522), Expect = 2e-57
 Identities = 123/354 (34%), Positives = 199/354 (56%), Gaps = 30/354 (8%)

Query: 106 DFFTAPIPDAQLLSTIGHQLGMLKLEKKVWPHFGS------AGNMGLIGESMPMKRLRDQ 159
           DF+  PI    +   +   L + KLE     H  S      +G   ++G S  ++++  +
Sbjct: 102 DFYQKPIDSDTIKLLVHRALNLSKLE-----HENSILARTRSGMSRIVGNSEAIQKVVRR 156

Query: 160 IKRIGPTDVSILIYGESGTGKETVAKAIHKTSSRAQKPFISVNCRAMSEKRLESELFGL- 218
            ++I  TD+S L+ GESGTGKE  A++IH+ S R  KPF+++NC ++ E  LESELFG  
Sbjct: 157 AEKIANTDISTLLLGESGTGKEVFARSIHEHSPRKDKPFVAINCASIPENLLESELFGYE 216

Query: 219 -------GETEEGQQPFLLQADGGTLLLNDILTLPKSQQLNLLRFLQEGTVETRQGVR-- 269
                   +T  G+   +  A GGTL L++I  +P   Q  +LRFLQE  +E R G R  
Sbjct: 217 KGAFTGANKTTVGK---IETAQGGTLFLDEIGDMPIGLQAKMLRFLQERVIE-RVGGRNE 272

Query: 270 -AVDVRILAANSSDIEKALIDGDFNEELYHYINVLRINVPSLKERASDIVLLAKHFLQEY 328
             VD+R++ A   D++  +    F E+LY+ +  + I +P L+ER  DI+LLA+ FL  Y
Sbjct: 273 IPVDIRVICATHRDLQAMVAQETFREDLYYRVGEMPIMIPPLRERDQDIILLARTFLNIY 332

Query: 329 SKEYNAQARSFSDDAVRGLTRYHWPGNVRELMNQIKRVVLMSDTVVLDESQLDL----PK 384
            +E+ A+A+SFS+ AV  +  + WPGN+RE+ N++K  V+M++  V+    L L      
Sbjct: 333 REEFKAKAKSFSETAVNAMLAHKWPGNIREMQNKLKSAVIMAEGTVIQPDDLGLMPVDAH 392

Query: 385 RSDGRRSLKSIRERSERDALLLVLESHSGQVSTAAKELGVSRATMYRLLNKHNL 438
                 +L+ +RE +E  A+    +     +S  A+ LGV+R T+Y L++K+++
Sbjct: 393 DEPETLNLREVREIAESRAIRRAYQKADKNMSKTAELLGVTRPTLYSLIDKYHM 446