Pairwise Alignments

Query, 444 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., Quorum-sensing regulator protein F from Alteromonas macleodii MIT1002

 Score =  202 bits (513), Expect = 2e-56
 Identities = 120/304 (39%), Positives = 178/304 (58%), Gaps = 13/304 (4%)

Query: 146 LIGESMPMKRLRDQIKRIGPTDVSILIYGESGTGKETVAKAIHKTSSRAQKPFISVNCRA 205
           +I  S  M  + DQ  RI   +VS+LI G SGTGKE +A AIHK S+R+ KPF+++NC A
Sbjct: 139 IITRSPEMLNVLDQAFRIAQREVSVLISGASGTGKELLANAIHKASNRSDKPFVAINCGA 198

Query: 206 MSEKRLESELFGLGE-----TEEGQQPFLLQADGGTLLLNDILTLPKSQQLNLLRFLQEG 260
           + E  LESELFG  +               +ADGGTL L++I  +P + Q+ LLR LQE 
Sbjct: 199 LPENLLESELFGHAKGAFTGAVAAHPGLFREADGGTLFLDEIGDMPMTLQVKLLRALQER 258

Query: 261 TVETRQGVRAVD--VRILAANSSDIEKALIDGDFNEELYHYINVLRINVPSLKERASDIV 318
            +      + VD  VRI++A   D+ K + +G F E+LY+ +NV+ + +PSLK R+ DI 
Sbjct: 259 QIRPVGSSKHVDIDVRIISATHKDLHKEMEEGTFREDLYYRLNVVNLKLPSLKSRSEDIP 318

Query: 319 LLAKHFLQEYSKEYNAQARSFSDDAVRGLTRYHWPGNVRELMNQIKRVVLMSDTVV---- 374
           LLA+  LQ+ ++ +      FSDDA++ L    WPGNVR+L+N +++ V ++ T V    
Sbjct: 319 LLARSLLQQSAQRHGVNVSQFSDDAMQQLVTSSWPGNVRQLVNVVEQCVALTQTPVIPLH 378

Query: 375 LDESQLDLPKRSDGRRSLKSIRERSERDALLLVLESHSGQVSTAAKELGVSRATMYRLLN 434
           L E  L   K+S    +L   R+  E+  L  +L+   G V+ AA+  G +R  M++L+ 
Sbjct: 379 LVEQALSATKQS--WPTLTEARDAFEQQYLHKLLKMTDGNVTRAAELAGRNRTDMHKLMK 436

Query: 435 KHNL 438
           KH L
Sbjct: 437 KHEL 440