Pairwise Alignments

Query, 444 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., Regulatory protein AtoC from Acinetobacter radioresistens SK82

 Score =  185 bits (470), Expect = 2e-51
 Identities = 119/371 (32%), Positives = 194/371 (52%), Gaps = 36/371 (9%)

Query: 106 DFFTAPIPDAQLLSTIGHQLGMLKLEKKVWPHFGSAGNMGLIGESMPMKRLRDQIKRIGP 165
           DF + P+  A L   +   L   +  +++     +  N  LIG S+P+++L+  +K+I  
Sbjct: 102 DFVSKPVNQAHLQQLVQKALNTPQSAQQLVQD--ALENRMLIGTSLPIQQLKIALKKIAR 159

Query: 166 TDVSILIYGESGTGKETVAKAIHKTSSRAQKPFISVNCRAMSEKRLESELFGLGE----- 220
           +   + I GESGTGKE VA  +H+ S+R+  PFI++NC A+    +ESELFG  +     
Sbjct: 160 SQAPVFITGESGTGKEVVANLVHRLSNRSDGPFIAINCGAIPSDLMESELFGHKKGSFTG 219

Query: 221 TEEGQQPFLLQADGGTLLLNDILTLPKSQQLNLLRFLQEGTVETRQGVRAVDV--RILAA 278
             + +Q  +  A GG+L L++I  LP + Q+ LLR +QE  +      + +DV  R+++A
Sbjct: 220 ASQDKQGLIYSAHGGSLFLDEIAELPLAMQVKLLRAVQEKKIRPIGSDQEIDVDFRVISA 279

Query: 279 NSSDIEKALIDGDFNEELYHYINVLRINVPSLKERASDIVLLAKHFLQEYSKEYNAQARS 338
           +  D+E  +  G F ++L+  I+V+ I +P L+ER  DI+LLAKHF+QE  KE++   + 
Sbjct: 280 SHQDLEILVQQGKFRQDLFFRIHVMDIVLPPLREREDDILLLAKHFIQEVCKEWDIPNKI 339

Query: 339 FSDDAVRGLTRYHWPGNVRELMNQIKRVVLMSDTVVLDESQLD----------------- 381
            ++   + L + ++PGNVREL N I+R + +SD   +D  QL                  
Sbjct: 340 LTERGQQFLMQQYFPGNVRELRNIIERAITLSDNEYIDLPQLQSAPLRNVQNFVAGQINH 399

Query: 382 ----------LPKRSDGRRSLKSIRERSERDALLLVLESHSGQVSTAAKELGVSRATMYR 431
                      P R      L+   E  E++ LL  L       + AAK+LG+S  ++  
Sbjct: 400 EPLTDQVIPLSPHRKIPAEGLEQYLENIEKEVLLTALNQTHWNRTLAAKKLGMSFRSLRY 459

Query: 432 LLNKHNLITDE 442
            L K  L TD+
Sbjct: 460 RLKKFGLDTDD 470