Pairwise Alignments

Query, 510 a.a., lysine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 534 a.a., Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  484 bits (1245), Expect = e-141
 Identities = 257/510 (50%), Positives = 344/510 (67%), Gaps = 25/510 (4%)

Query: 15  AQEENKLIAERRSKLDHIRKNCKAN---GHPNSFRRDSLAGDLQKKFGEKSKEELEALNH 71
           A ++N+LIAERR KL  +R+  K       PN F+    A DL  ++GE +KE LEA   
Sbjct: 30  AHDDNQLIAERREKLKALREAQKQGQGVAFPNDFKPVDKAADLFARYGETTKEALEAEPV 89

Query: 72  VVSIAGRVMAKR----GPFLVIQETS-----GRIQAYASKE-VQQELKDKYQGLDIGDII 121
             S+AGR+M KR      F  +Q+ S     GRIQ Y + + V +     ++  D+GDII
Sbjct: 90  RASVAGRMMLKRVMGKASFATLQDASFGPSGGRIQIYVNNDGVGEAQHGAFKHWDLGDII 149

Query: 122 GVQGALHKSGKGDLYVNMEQFQLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRN 181
            V+G L ++  G+L +  ++ +L+TK+LRPLP+KFHG+ DQE++YRQRYVDL+ +E +R 
Sbjct: 150 AVEGVLMRTRTGELTIQADRIRLITKSLRPLPDKFHGIADQEIKYRQRYVDLMTDETARR 209

Query: 182 AFIVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPEL 241
            F+ RS+ +++IR+FM+S  F+EVETPM+H IPGGA+A+PF THHNALD  M+LRIAPEL
Sbjct: 210 RFVARSQALASIRDFMVSHGFLEVETPMLHPIPGGANAKPFKTHHNALDQEMFLRIAPEL 269

Query: 242 YLKRLVVGGFDRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVA 301
           YLKRL+VGGFDRVFEINRNFRNEG+S RHNPEFTMMEFY AY +Y+DLMD  E+L+  V 
Sbjct: 270 YLKRLLVGGFDRVFEINRNFRNEGISVRHNPEFTMMEFYAAYWNYQDLMDFNEQLIRHVV 329

Query: 302 LEVLGSTSMPYGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQALTEEDIQNRDLMVSIAK 361
            +V G   + Y    V+    + R+++ +AI  Y            + + +   + +  K
Sbjct: 330 RQVRGDEPLTYQGQPVDILSPFERLTIREAIVKYTD--------AGDSVDDAAWLQAQLK 381

Query: 362 SVHVDVEPFWTCGQLLEEI----FGETAEPKLMQPTFITGYPADISPLARRSDDNPFFTD 417
            + +  E     G+ L  +    F E  E KL  PTFI  +P +ISPLAR +D NP  T+
Sbjct: 382 KLGLSEEKHQLSGRSLPSLQVLYFEEKVEDKLWNPTFIMDHPTEISPLARANDANPAVTE 441

Query: 418 RFEFFIGGREVANGFSELNDAEDQDARFKAQVEAKESGDDEAMFYDADYITALEHGLPPT 477
           RFE +I GRE  N FSELNDAEDQ ARF+AQ  AK+ GD+EAM+YDADYI ALE+G+PP 
Sbjct: 442 RFELYITGREFGNAFSELNDAEDQAARFQAQASAKDGGDEEAMYYDADYIRALEYGMPPA 501

Query: 478 AGQGIGIDRLVMLLTNTHTIRDVILFPAMR 507
            G GIGIDRL+MLLT++ +IRDVILFPA+R
Sbjct: 502 GGCGIGIDRLMMLLTDSPSIRDVILFPALR 531