Pairwise Alignments

Query, 510 a.a., lysine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., putative lysyl-tRNA synthetase (VIMSS) from Escherichia coli BW25113

 Score =  147 bits (372), Expect = 4e-40
 Identities = 103/332 (31%), Positives = 166/332 (50%), Gaps = 36/332 (10%)

Query: 186 RSKVMSAIRNFMISKQFMEVETPMM--------HVIPGGASARPFITHHNALDMPMYLRI 237
           R+ +M+ IR F   +  +EVETP M        H++P       F+   ++  M ++L  
Sbjct: 19  RAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETR---FVGPGHSQGMNLWLMT 75

Query: 238 APELYLKRLVVGGFDRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELL 297
           +PE ++KRL+V G   VF++ R+FRNE +   HNPEFTM+E+Y  + D   LM+  ++LL
Sbjct: 76  SPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLL 135

Query: 298 SSVALEVLGSTSMPYGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQALTEEDIQNRDLMV 357
             V L+   + S+ Y +  + +                     +I  L+ +  Q R++  
Sbjct: 136 QQV-LDCPAAESLSYQQAFLRY--------------------LEIDPLSADKTQLREVAA 174

Query: 358 SIAKSVHVDVEPFWTCGQLLEEIFGETAEPKL--MQPTFITGYPADISPLARRSDDNPFF 415
            +  S   D E       LL+ +F    EP +   +PTF+  +PA  + LA+ S ++   
Sbjct: 175 KLDLSNVADTEE--DRDTLLQLLFTFGVEPNIGKEKPTFVYHFPASQASLAQISTEDHRV 232

Query: 416 TDRFEFFIGGREVANGFSELNDAEDQDARFKAQVEAKESGDDEAMFYDADYITALEHGLP 475
            +RFE +  G E+ANGF EL DA +Q  RF+     + +        D + I AL+ G+P
Sbjct: 233 AERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQHPIDQNLIEALKVGMP 292

Query: 476 PTAGQGIGIDRLVMLLTNTHTIRDVILFPAMR 507
             +G  +G+DRLVML     T+ +VI F   R
Sbjct: 293 DCSGVALGVDRLVMLALGAETLAEVIAFSVDR 324