Pairwise Alignments

Query, 510 a.a., lysine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., lysyl-tRNA synthetase from Agrobacterium fabrum C58

 Score =  395 bits (1014), Expect = e-114
 Identities = 213/487 (43%), Positives = 312/487 (64%), Gaps = 14/487 (2%)

Query: 25  RRSKLDHIRKNCKANGHPNSFRRDSLAGDLQKKFGEKSKEELEALNHVVSIAGRVMAKR- 83
           RR KL  +R+    + +P  F R     +L +K+ +  + ++E     V++AGRV + R 
Sbjct: 19  RRQKLALLREQI-GDVYPAHFHRTLSNAELAEKYAD-IEADVET-GDTVTVAGRVYSSRN 75

Query: 84  -GPFLVIQETSGRIQAYASKEVQQEL-KDKYQGLDIGDIIGVQGALHKSGKGDLYVNMEQ 141
            G F+ I + SG++Q ++ K+   E  ++    +DIGDIIGV G + ++ +G+L +N E+
Sbjct: 76  SGMFMDIHDASGKVQIFSHKDTTPEAARNLLPMIDIGDIIGVTGKVRRTKRGELTINAEE 135

Query: 142 FQLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVRSKVMSAIRNFMISKQ 201
             +LTK+L P+PEK+HG++D E+RYR+R++D++ NE+S+  F+ RSK++S IR FM ++ 
Sbjct: 136 ITMLTKSLLPMPEKWHGVSDIELRYRKRHLDILANEDSKLRFLQRSKILSGIRRFMEAEG 195

Query: 202 FMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF-DRVFEINRN 260
           F+EVETPM+  + GGA+A PF T HN L M MYLRIAPEL+LKR +V G  D+VFEINRN
Sbjct: 196 FLEVETPMLQTVYGGATADPFKTFHNTLKMDMYLRIAPELFLKRTLVSGLSDKVFEINRN 255

Query: 261 FRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMPYGEHTVEFG 320
           FRNEG+S RHNPEFTMME Y AYADY+D+M L E L  ++A+ + G+T + +   T+ F 
Sbjct: 256 FRNEGVSTRHNPEFTMMECYWAYADYEDIMGLVERLFETLAIALHGTTEVEFQGQTISFK 315

Query: 321 GKYARMSMFDAIKHYNPNHAQIQALTEEDIQNRDLMVSIAKSVHVDVEPFWTCGQLLEEI 380
           G + R+ M DA+K       +   +    I+  +   + AK+    VE  WT G+ L  I
Sbjct: 316 GPFKRVPMPDAVK-------EATGIDFLAIKTDEEARAAAKAAGFAVEKDWTWGECLAFI 368

Query: 381 FGETAEPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAED 440
           F E  E  L+QP+ +T +P DISP A+     P   +RFE +    EV N FSELND E+
Sbjct: 369 FEEKVEATLIQPSHVTHFPKDISPFAKEVPGEPRLVERFESYCNAWEVGNAFSELNDPEE 428

Query: 441 QDARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDV 500
           Q  R   Q+E   +  ++    D +++ A++ G+PP  G GIG+DRL+MLLTN  +IRDV
Sbjct: 429 QRRRMVEQLEQAHARGEKDKQLDDEFLDAIDQGMPPAGGLGIGVDRLIMLLTNAPSIRDV 488

Query: 501 ILFPAMR 507
           ILFPA R
Sbjct: 489 ILFPARR 495