Pairwise Alignments

Query, 437 a.a., branched-chain amino acid transport system II carrier protein from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., branched-chain amino acid transporter carrier protein BrnQ from Escherichia coli ECRC62

 Score =  341 bits (874), Expect = 3e-98
 Identities = 178/422 (42%), Positives = 265/422 (62%), Gaps = 4/422 (0%)

Query: 1   MKQTLKLADILALGFMLFAFFLGAGNIIFPPLAGQLAGENITPAMFGFLLTAVGLPLITI 60
           M   L+  DI+ALGFM FA F+GAGNIIFPP+ G  AGE++  A FGFL+TAVGLP++T+
Sbjct: 1   MTHQLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTAAFGFLITAVGLPVLTV 60

Query: 61  IAIAVAGGSWEHLTKDLPVKASVLMAALILIVIGPAFAAPRTGLVAYEMAVKPFFAESTQ 120
           +A+A  GG  + L+  +   A VL+A +  + +GP FA PRT  V++E+ + P   +S  
Sbjct: 61  VALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRTATVSFEVGIAPLTGDSAL 120

Query: 121 SYLTLFSVLFFAVAMFFSWSQGKLVDLIGKLLTPALFICLIILALGVFMNPQGEMIAAQG 180
             L ++S+++FA+ +  S   GKL+D +G  L P   I L+IL++   + P G +  A  
Sbjct: 121 P-LFIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALVILSVAAIVWPAGSISTATE 179

Query: 181 EYLSQPLTKGFLEGYNTMDTFASLMFGILIVDALRSKGITDRAATTRYLITSAVIAAIGL 240
            Y +   + GF+ GY TMDT  +++FGI+IV+A RS+G+T+    TRY + + ++A +GL
Sbjct: 180 AYQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGVTEARLLTRYTVWAGLMAGVGL 239

Query: 241 ALVYGSLFYLGATSSSVAAGANNGGAILSQYVQALFGSYGQLVLSVIVMLACLTTAVGLI 300
            L+Y +LF LG+ S+S+   + NG AIL  YVQ  FG  G  +L+ ++ +ACL TAVGL 
Sbjct: 240 TLLYLALFRLGSDSASLVDQSANGAAILHAYVQHTFGGGGSFLLAALIFIACLVTAVGLT 299

Query: 301 SACSDFFSKHTSLSYKQWVVINGVACGVVANVGLAQLITLSIPVLFALYPVAIALVALTF 360
            AC++FF+++  LSY+  V I G    VV+N+GL+QLI +S+PVL A+YP  IALV L+F
Sbjct: 300 CACAEFFAQYVPLSYRTLVFILGGFSMVVSNLGLSQLIQISVPVLTAIYPPCIALVVLSF 359

Query: 361 VRHKLPNPRVAYRAVLSVSLLVALLDAAKVAGFDVSAFSF---LPFFEYGMGWLLPTCAA 417
            R    N        + +SLL  +LD  K + F     S+   LP  E G+ WL+PT   
Sbjct: 360 TRSWWHNSSRVIAPPMFISLLFGILDGIKASAFSDILPSWAQRLPLAEQGLAWLMPTVVM 419

Query: 418 MI 419
           ++
Sbjct: 420 VV 421