Pairwise Alignments

Query, 529 a.a., peptide chain release factor 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Peptide chain release factor 3 from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  553 bits (1424), Expect = e-162
 Identities = 282/533 (52%), Positives = 372/533 (69%), Gaps = 7/533 (1%)

Query: 1   MSTTPYFGEVSKRRTFAIISHPDAGKTTITEKVLLFGRAIQVAGTVKGRGSNQHAKSDWM 60
           MS  P   +V +RRTFAIISHPDAGKTT+TEK+LLF  AI +AG+VK R + +HA SDWM
Sbjct: 1   MSDIP--NQVRRRRTFAIISHPDAGKTTLTEKLLLFSGAINIAGSVKARKAARHATSDWM 58

Query: 61  EMEKERGISVTTSVMQFPYGDCLVNLLDTPGHEDFSEDTYRTLTAVDSCLMVIDAAKGVE 120
           E+EK+RGISV +SVMQ  Y DC++NLLDTPGH+DFSEDTYR LTAVD+ LMVIDA  GVE
Sbjct: 59  EIEKQRGISVASSVMQMEYRDCVINLLDTPGHQDFSEDTYRVLTAVDAALMVIDAGNGVE 118

Query: 121 DRTRKLMEVTRLRDTPIVTFMNKLDREIRDPMELMDEVENELKIACSPITWPIGCGKEFK 180
            +TR+L++V R R+TPI+TF+NK+DRE++ P++LMDE+E EL +   P TWP+G GK F+
Sbjct: 119 PQTRRLLQVCRARNTPILTFVNKMDREVQAPLDLMDEIERELGMTVVPFTWPVGMGKTFR 178

Query: 181 GVYHIHRDETILYTSGQGHTIQEERIIKGLDNPELDQAVGADLAAQLREELELVLGASHE 240
           GV+    D+  ++ +G+     +E ++ GLDNPE  +  GA+   Q R+ELELV GAS  
Sbjct: 179 GVFDRRTDQMRVFAAGEDRRGGDEDVLAGLDNPESLKRFGAEFE-QARDELELVAGASPA 237

Query: 241 FDRELFLQGELTPVFFGTALGNFGVDHMLDGLTQWAPSPMPRQAAERVVEASEEKFTGFV 300
           F+ + FL G+ TP+ FG+A+ NFGV  +LD L   AP P  R A +R V+  E KF+G V
Sbjct: 238 FEEDKFLAGQQTPMLFGSAVNNFGVREVLDALVDLAPPPGERPAIQRTVKPEETKFSGVV 297

Query: 301 FKIQANMDPKHRDRIAFVRIVSGTYKQGMKMNHVRLGKQVNISDAVTFMAGDRARAEEAF 360
           FKIQANMDP HRDRIAFVR+ SG +++GMK+  VR GK +  +  V+F++  R   +EAF
Sbjct: 298 FKIQANMDPAHRDRIAFVRVASGHFERGMKLKVVRSGKDLRPNTVVSFLSQRRELLDEAF 357

Query: 361 AGDIIGLHNHGTIQIGDTFTQGETLKFTGIPNFAPELFRRIRLRDPLKQKQLLKGLVQLS 420
           AGDIIG+ NHG +Q+GDT T+GE+L+FTG+P FAPE+ R + + DPL+ KQL  GL QL 
Sbjct: 358 AGDIIGIPNHGVLQLGDTLTEGESLQFTGLPFFAPEIIRSVEVADPLRSKQLRAGLTQLG 417

Query: 421 EEGAVQVFRPLQNNDLIVGAVGVLQFDVVVSRLKSEYNVEAIYEGVNVATARWVEC--DD 478
           EEGA+QVFRP+  + L++GAVG LQF+VV  RL+ EY V+A         ARWV C  +D
Sbjct: 418 EEGAIQVFRPVAGSVLLLGAVGQLQFEVVAHRLEHEYGVKARIMNSPYQVARWVTCAPED 477

Query: 479 VKKFE--EFKRKNQSNLALDGGDNLAYIAPTMVNLNLAQERSPEVKFRATREH 529
             + E   F   N   +ALD  D    +      L   +   P++KF A REH
Sbjct: 478 GGEVELKRFIDANSHRVALDAVDAPTLLVDHAATLRAVEANWPKIKFHAMREH 530