Pairwise Alignments

Query, 529 a.a., peptide chain release factor 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 528 a.a., peptide chain release factor 3 from Magnetospirillum magneticum AMB-1

 Score =  573 bits (1477), Expect = e-168
 Identities = 288/519 (55%), Positives = 368/519 (70%)

Query: 10  VSKRRTFAIISHPDAGKTTITEKVLLFGRAIQVAGTVKGRGSNQHAKSDWMEMEKERGIS 69
           ++ RRTFAIISHPDAGKTT+TEK+L+FG AIQ+AG V+ RG  +  +SDWM +EKERGIS
Sbjct: 8   IALRRTFAIISHPDAGKTTLTEKLLMFGGAIQMAGAVRARGEQRRTRSDWMAIEKERGIS 67

Query: 70  VTTSVMQFPYGDCLVNLLDTPGHEDFSEDTYRTLTAVDSCLMVIDAAKGVEDRTRKLMEV 129
           V+ SVM F Y     NLLDTPGHEDFSEDTYRTLTAVDS +MV+DAAKG+E +T KL EV
Sbjct: 68  VSASVMSFEYSGLSFNLLDTPGHEDFSEDTYRTLTAVDSAVMVLDAAKGIETQTLKLFEV 127

Query: 130 TRLRDTPIVTFMNKLDREIRDPMELMDEVENELKIACSPITWPIGCGKEFKGVYHIHRDE 189
            RLRD PI+TF+NK+DRE R+  +L+ EVE  L +   P+TWPIG G++ KGVY +  D 
Sbjct: 128 CRLRDVPIITFVNKVDREGRETFDLLHEVEKTLALDVCPVTWPIGMGRDLKGVYDLVNDR 187

Query: 190 TILYTSGQGHTIQEERIIKGLDNPELDQAVGADLAAQLREELELVLGASHEFDRELFLQG 249
            I++  G+G  I E  +   LD+P+LD+ +G   A +LREE+ELV G   EFD E F  G
Sbjct: 188 VIMFDPGRGDHIAEISVDASLDSPKLDEVLGKAAADRLREEVELVRGGYPEFDLESFRAG 247

Query: 250 ELTPVFFGTALGNFGVDHMLDGLTQWAPSPMPRQAAERVVEASEEKFTGFVFKIQANMDP 309
            LTPVFFG+AL  FGV  +L G+ Q AP P+ R   +RVVE  E K +GFVFK+QANMDP
Sbjct: 248 HLTPVFFGSALKTFGVAELLKGIGQLAPPPVARPTDKRVVEPDEAKVSGFVFKVQANMDP 307

Query: 310 KHRDRIAFVRIVSGTYKQGMKMNHVRLGKQVNISDAVTFMAGDRARAEEAFAGDIIGLHN 369
            HRDRIAF RI SG +K+GMK+ HVR GK + + + V F+A DR  AEEAF GDI+G+ N
Sbjct: 308 NHRDRIAFFRICSGRFKRGMKVKHVRSGKVMALVNPVFFLARDRELAEEAFPGDIMGIPN 367

Query: 370 HGTIQIGDTFTQGETLKFTGIPNFAPELFRRIRLRDPLKQKQLLKGLVQLSEEGAVQVFR 429
           HG ++IGDT ++ E + F GIP FAPE+ RR+RL DP+K KQL K L  L+EEG  QVF+
Sbjct: 368 HGQLRIGDTLSESEDMNFLGIPTFAPEVLRRVRLDDPMKAKQLKKALEDLAEEGVSQVFK 427

Query: 430 PLQNNDLIVGAVGVLQFDVVVSRLKSEYNVEAIYEGVNVATARWVECDDVKKFEEFKRKN 489
           PL  +  IVG VG LQFDV+ +R++SEYN++A +E     TARWV  D   + + F   N
Sbjct: 428 PLDGSTWIVGVVGPLQFDVLTTRIESEYNIKAGFEDGGFVTARWVAADTEAEMKRFMDGN 487

Query: 490 QSNLALDGGDNLAYIAPTMVNLNLAQERSPEVKFRATRE 528
           +SN+A D    + Y+A     LN AQ+   +++F ATRE
Sbjct: 488 KSNMAEDRDGGMVYLARNSWQLNRAQQDFEKIRFTATRE 526