Pairwise Alignments

Query, 529 a.a., peptide chain release factor 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 704 a.a., elongation factor EF-2 (NCBI) from Escherichia coli BW25113

 Score =  158 bits (400), Expect = 6e-43
 Identities = 140/493 (28%), Positives = 222/493 (45%), Gaps = 49/493 (9%)

Query: 3   TTPYFGEVSKRRTFAIISHPDAGKTTITEKVLLFGRAIQVAGTVKGRGSNQHAKSDWMEM 62
           TTP    +++ R   I +H DAGKTT TE++L +       G V        A  DWME 
Sbjct: 4   TTP----IARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGA----ATMDWMEQ 55

Query: 63  EKERGISVTTSV-------MQFPYGDCLVNLLDTPGHEDFSEDTYRTLTAVDSCLMVIDA 115
           E+ERGI++T++        M   Y    +N++DTPGH DF+ +  R++  +D  +MV  A
Sbjct: 56  EQERGITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCA 115

Query: 116 AKGVEDRTRKLMEVTRLRDTPIVTFMNKLDREIRDPMELMDEVENELKIACSPITWPIGC 175
             GV+ ++  +         P + F+NK+DR   + ++++++++  L     P+   IG 
Sbjct: 116 VGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVNQIKTRLGANPVPLQLAIGA 175

Query: 176 GKEFKGVYHIHRDETILYT-SGQGHTIQEERIIKGLDNPELDQAVGADL---AAQLREEL 231
            + F GV  + + + I +  + QG T + E I    D  EL      +L   AA+  EEL
Sbjct: 176 EEHFTGVVDLVKMKAINWNDADQGVTFEYEDI--PADMVELANEWHQNLIESAAEASEEL 233

Query: 232 -ELVLGASHEFDREL-------FLQGELTPVFFGTALGNFGVDHMLDGLTQWAPSPMPRQ 283
            E  LG     + E+        L  E+  V  G+A  N GV  MLD +  + PSP+   
Sbjct: 234 MEKYLGGEELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYLPSPVDVP 293

Query: 284 AAERVVE-----------ASEEKFTGFVFKIQANMDPKHRDRIAFVRIVSGTYKQG-MKM 331
           A   +++           + +E F+   FKI    DP     + F R+ SG    G   +
Sbjct: 294 AINGILDDGKDTPAERHASDDEPFSALAFKIAT--DP-FVGNLTFFRVYSGVVNSGDTVL 350

Query: 332 NHVRLGKQVNISDAVTFMAGDRARAEEAFAGDIIGLHNHGTIQIGDTFTQGETLKFTGIP 391
           N V+  ++      V   A  R   +E  AGDI        +  GDT    +        
Sbjct: 351 NSVKAARE-RFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDPDAPIILERM 409

Query: 392 NFAPELFRRIRLRDPLKQKQLLKGLV---QLSEEGAVQVFRPLQNNDLIVGAVGVLQFDV 448
            F PE    I +    K  Q   GL       E+ + +V+   ++N  I+  +G L  D+
Sbjct: 410 EF-PEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWTDEESNQTIIAGMGELHLDI 468

Query: 449 VVSRLKSEYNVEA 461
           +V R+K E+NVEA
Sbjct: 469 IVDRMKREFNVEA 481