Pairwise Alignments

Query, 529 a.a., peptide chain release factor 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 704 a.a., elongation factor G from Dickeya dadantii 3937

 Score =  158 bits (400), Expect = 6e-43
 Identities = 135/490 (27%), Positives = 215/490 (43%), Gaps = 43/490 (8%)

Query: 3   TTPYFGEVSKRRTFAIISHPDAGKTTITEKVLLFGRAIQVAGTVKGRGSNQHAKSDWMEM 62
           TTP    +++ R   I +H DAGKTT TE++L +       G V        A  DWME 
Sbjct: 4   TTP----IARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGA----ATMDWMEQ 55

Query: 63  EKERGISVTTSV-------MQFPYGDCLVNLLDTPGHEDFSEDTYRTLTAVDSCLMVIDA 115
           E+ERGI++T++        M   Y    +N++DTPGH DF+ +  R++  +D  +MV  A
Sbjct: 56  EQERGITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCA 115

Query: 116 AKGVEDRTRKLMEVTRLRDTPIVTFMNKLDREIRDPMELMDEVENELKIACSPITWPIGC 175
             GV+ ++  +         P + F+NK+DR   + ++++D+++  L     P+   IG 
Sbjct: 116 VGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVDQIKVRLGANPVPLQLAIGA 175

Query: 176 GKEFKGVYHIHRDETILYT-SGQGHTIQEERIIKGLDN--PELDQAVGADLAAQLREELE 232
            + F GV  + + + I +  S QG T   E I   + +   E  Q +    A    E +E
Sbjct: 176 EENFTGVVDLVKMKAINWNDSDQGVTFTYEDIPADMQDLADEWHQNLIESAAEASEELME 235

Query: 233 LVLGASHEFDREL-------FLQGELTPVFFGTALGNFGVDHMLDGLTQWAPSPMPRQAA 285
             LG     + E+        L  E+  V  G+A  N GV  MLD +  + P+P    A 
Sbjct: 236 KYLGGEELTEEEIKKALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVVDYLPAPTDVPAI 295

Query: 286 ERVVE-----------ASEEKFTGFVFKIQANMDPKHRDRIAFVRIVSGTYKQGMKMNHV 334
             +++           + +E F+   FKI    DP     + F R+ SG    G  + + 
Sbjct: 296 NGILDDGKDTPAERHASDDEPFSALAFKIAT--DP-FVGNLTFFRVYSGVVNSGDTVLNS 352

Query: 335 RLGKQVNISDAVTFMAGDRARAEEAFAGDIIGLHNHGTIQIGDTFTQGETLKFTGIPNFA 394
              ++      V   A  R   +E  AGDI        +  GDT    E         F 
Sbjct: 353 VKSERERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVITGDTLCDPENPIILERMEF- 411

Query: 395 PELFRRIRLRDPLKQKQLLKGLV---QLSEEGAVQVFRPLQNNDLIVGAVGVLQFDVVVS 451
           PE    I +    K  Q   GL       E+ + +V+   ++N  I+  +G L  D++V 
Sbjct: 412 PEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWTDEESNQTIIAGMGELHLDIIVD 471

Query: 452 RLKSEYNVEA 461
           R+K E+NVEA
Sbjct: 472 RMKREFNVEA 481