Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1247 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  333 bits (853), Expect = 4e-95
 Identities = 185/495 (37%), Positives = 292/495 (58%), Gaps = 12/495 (2%)

Query: 181  FYQKLSRPITMLITWVNSLNDTQRS----PLPLRLTHDDELSELASTFQSMW---KGKEL 233
            FY  +   +T    W   +++ +++    P  L ++      +L + F +++      +L
Sbjct: 739  FYAAMWHQLTAQGHWQGEISNRRKNGELYPSWLTISAVRNREQLITHFVAVFADISSLKL 798

Query: 234  AESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHSTGVLFYLDLDRFKTINDSLGH 293
            A+++L+  A++D LTGL NR+L   +L  A+   Q +   G + +LDLDRFK INDSLGH
Sbjct: 799  AQARLDYQAHHDPLTGLPNRTLFESRLQAALNGHQETGQQGAVLFLDLDRFKHINDSLGH 858

Query: 294  TIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIPYLSPAK-AEEVAKQLLTLISNPY 352
             IGD L+K +A+R++   ++    AR+GGDEF +L+P L  A  A+ +A +LL   + P+
Sbjct: 859  PIGDLLLKDIAVRLKEQLRDIDTVARLGGDEFIILLPGLQHASDAQYLANKLLACFTPPF 918

Query: 353  AVDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTALYRAKASGRNKFMFYEPEMQAQVES 412
               +H+F+ + SIG S++P  G+    +++ AD A+YR+KA GRN+   Y  ++ AQ   
Sbjct: 919  QAGEHEFFISASIGTSLYPEDGTDVATLVKNADAAMYRSKAKGRNRVESYTRDLTAQANE 978

Query: 413  FLEIEKGLHEALNQRQLELFYQPQVD-EQHNIIGVEALIRWNHPKRGLLPPGVFMPIAEE 471
             + +E  L  A+ + +L L+YQP++    H +IG EALIRW+HP  G +PP  F+ +AEE
Sbjct: 979  RVALEHELRRAIERDELSLYYQPKLSLATHELIGAEALIRWHHPTFGDVPPEHFIALAEE 1038

Query: 472  TGQILPIGNWIIEQACYQYAQWKKQGILPPHFRRLAINISPLQFAQESFIEQVNHALRQA 531
             G IL IG+W++EQAC Q   W  QG     F  L++N++  Q      + ++   L   
Sbjct: 1039 NGMILQIGDWVLEQACRQMHAW--QGHFDD-FGPLSVNLAGAQLRHPGLLGRIKQLLHDY 1095

Query: 532  GITGEPIELEITESLLLENVESAIEKMAKLKESQISISIDDFGTGYSSLRYLKHLAVDVL 591
             +    ++LEITE+ ++   E A++ + +LK+  + ++IDDFGTGYSSL YLK L +D L
Sbjct: 1096 QLDPGRLQLEITENFIMSQAEEALDVLHQLKDLGVQLAIDDFGTGYSSLSYLKRLPLDFL 1155

Query: 592  KIDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVIAEGVEDTSELAALKKLGCNQFQGYL 651
            KID+SFV  L  D +D AIV  I+A+   +   +IAEGVE+ ++ A L   GC Q QGY+
Sbjct: 1156 KIDQSFVRGLPDDPHDAAIVRAIIALGHSMQFTIIAEGVENPAQQAFLAAEGCEQMQGYI 1215

Query: 652  FDKPLRAEEIAQRFV 666
               PL     A  F+
Sbjct: 1216 VSLPLPPALFAATFL 1230