Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1283 a.a., diguanylate phosphodiesterase from Pseudomonas simiae WCS417

 Score =  361 bits (926), Expect = e-103
 Identities = 189/463 (40%), Positives = 288/463 (62%), Gaps = 11/463 (2%)

Query: 215  DELSELAS--TFQSMWKGKELAESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHS 272
            D+  +LAS   F S    ++ +E ++++LAYYD+LT L NR+L   +L  A++ A+   S
Sbjct: 819  DDEGDLASYVCFFSDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLHTALQAAERQKS 878

Query: 273  TGVLFYLDLDRFKTINDSLGHTIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIP-- 330
              VL +LDLDRFK INDSLGH  GD+++K +A R+      D   AR+GGDEF +L+   
Sbjct: 879  WVVLMFLDLDRFKPINDSLGHAAGDRMLKEMATRLLGCVAEDDTVARMGGDEFTLLLQPR 938

Query: 331  ---YLSPAKAEEVAKQLLTLISNPYAVDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTA 387
                ++  +A  VA+Q+L  +  P+ ++  +F+ T SIGI++ P  G+    +++ ADTA
Sbjct: 939  VNREMALNRAIHVAEQILASLVKPFVLEGREFFVTASIGIALSPQDGNELSQLMKNADTA 998

Query: 388  LYRAKASGRNKFMFYEPEMQAQVESFLEIEKGLHEALNQRQLELFYQPQVD-EQHNIIGV 446
            +Y AK  G+N F FY+ +M A     LE+E  L  AL Q +  L+YQPQ   +   + G 
Sbjct: 999  MYHAKERGKNNFQFYQADMNASALERLELESDLRHALEQNEFVLYYQPQFSGDGKRLTGA 1058

Query: 447  EALIRWNHPKRGLLPPGVFMPIAEETGQILPIGNWIIEQACYQYAQWKKQGILPPHFRRL 506
            EAL+RW HP+RGL+PPG F+P+ EE G ++ +G+W+I +AC Q   W +  +  P   ++
Sbjct: 1059 EALLRWRHPRRGLVPPGDFIPVLEELGLVVDVGDWVISEACRQLKTWHQNKVRVP---KV 1115

Query: 507  AINISPLQFAQESFIEQVNHALRQAGITGEPIELEITESLLLENVESAIEKMAKLKESQI 566
            ++NIS  QF+      ++   L+  G+    +ELE+TES+L+  V  A++ +  LK   +
Sbjct: 1116 SVNISARQFSDGQLGTRIATILKDTGLPPACLELELTESILMREVNEAMQILDSLKNLGL 1175

Query: 567  SISIDDFGTGYSSLRYLKHLAVDVLKIDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVI 626
            SI++DDFGTGYSSL YLK   +DVLKIDR+FV+ L   + D  I   I+A+A  LNL VI
Sbjct: 1176 SIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVI 1235

Query: 627  AEGVEDTSELAALKKLGCNQFQGYLFDKPLRAEEIAQRFVSNS 669
            AEGVE   +L  L++ GC++ QGYLF +P+ A     +F +++
Sbjct: 1236 AEGVETHEQLDFLREHGCDEVQGYLFGRPMPANRFEAQFSNDA 1278