Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1098 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  371 bits (953), Expect = e-107
 Identities = 196/445 (44%), Positives = 279/445 (62%), Gaps = 7/445 (1%)

Query: 234  AESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHSTGVLFYLDLDRFKTINDSLGH 293
            A++++  LAY+D LT L NR+LL+ +LS  I   +  +  G L +LDLD FK INDSLGH
Sbjct: 653  AQAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHINDSLGH 712

Query: 294  TIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIPYLSPAKAE------EVAKQLLTL 347
             +GD ++K V  R+EA  + +   AR+GGDEF VL+  L   + E      E+A  L  L
Sbjct: 713  PVGDTVLKIVTARLEASVRMEDTVARLGGDEFVVLLSGLDGTRTEVSNQVQELADTLREL 772

Query: 348  ISNPYAVDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTALYRAKASGRNKFMFYEPEMQ 407
            +S P  +D H+   T SIG+++ P  GS   D+L++AD ALYRAK SGRN    +   MQ
Sbjct: 773  LSEPMFLDGHRLQVTPSIGVALIPDHGSTPADLLKRADIALYRAKDSGRNTTQMFHNSMQ 832

Query: 408  AQVESFLEIEKGLHEALNQRQLELFYQPQVDEQHN-IIGVEALIRWNHPKRGLLPPGVFM 466
                  L +E  L  AL++ +  + YQPQVD + N I+G EAL+RW HP+ G   P  F+
Sbjct: 833  KTASERLRMETDLRLALSRGEFSVHYQPQVDARGNRIVGAEALVRWQHPQLGAQSPSEFI 892

Query: 467  PIAEETGQILPIGNWIIEQACYQYAQWKKQGILPPHFRRLAINISPLQFAQESFIEQVNH 526
             + E++G IL +G WI+++AC  + Q   +G++ P    L +NISP QF Q  F+E+V  
Sbjct: 893  KVLEDSGLILEVGTWILDEACAAFQQLIAEGLVDPLNFSLCVNISPRQFRQNDFVERVER 952

Query: 527  ALRQAGITGEPIELEITESLLLENVESAIEKMAKLKESQISISIDDFGTGYSSLRYLKHL 586
            +L+Q  +    ++LEITE ++++N++  I KM +LK+  +S ++DDFGTGYSSL YLK L
Sbjct: 953  SLKQHKLPFSLLKLEITEGIVIQNLDDTISKMRRLKKLGVSFAMDDFGTGYSSLTYLKRL 1012

Query: 587  AVDVLKIDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVIAEGVEDTSELAALKKLGCNQ 646
             VD LKID+SFV     D ND  I+  I+A+AR LNLEVIAEGVE   +LA L+ LGC+ 
Sbjct: 1013 PVDALKIDQSFVRDATHDPNDAEIIRAIVAMARSLNLEVIAEGVETQDQLAFLQGLGCHL 1072

Query: 647  FQGYLFDKPLRAEEIAQRFVSNSYR 671
            +QGYL  +PL      +R ++   R
Sbjct: 1073 YQGYLHSRPLPMIGFRERLLAGEGR 1097