Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1059 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

 Score =  328 bits (841), Expect = 8e-94
 Identities = 171/435 (39%), Positives = 272/435 (62%), Gaps = 6/435 (1%)

Query: 231  KELAESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHSTGVLFYLDLDRFKTINDS 290
            ++ +E+++  LA++D LT L NRSL +++L  A++ AQ       + ++DLDRFK INDS
Sbjct: 614  RKRSEARIRFLAHHDVLTELPNRSLCIERLGLALQQAQRKGQRVGVLFIDLDRFKNINDS 673

Query: 291  LGHTIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIPYLSPAKA--EEVAKQLLTLI 348
            LGH +GD L+++VA RM    +     +R+GGDEF V++  ++  +     V ++L++LI
Sbjct: 674  LGHHVGDALLRSVAARMSQAVRPGDTVSRLGGDEFVVVLNNVADGQEILSLVERRLISLI 733

Query: 349  SNPYAVDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTALYRAKASGRNKFMFYEPEMQA 408
              P+ +D  + + + S+GI+V+P        ++R AD A+Y++KASGR+   F+ PEM  
Sbjct: 734  RQPHDIDGAEIHVSCSVGIAVYPDDAQDIDALMRHADVAMYQSKASGRDTARFFTPEMNE 793

Query: 409  QVESFLEIEKGLHEALNQRQLELFYQPQVDEQHN-IIGVEALIRWNHPKRGLLPPGVFMP 467
            + +  L++E  L  A+ + +L L YQP++D     +I VEAL+RW   + G + P  F+P
Sbjct: 794  RAQQRLQLESSLRHAIERDELSLHYQPRIDAHSGELICVEALLRWQSAELGQVRPAQFIP 853

Query: 468  IAEETGQILPIGNWIIEQACYQYAQWKKQGILPPHFRRLAINISPLQFAQESFIEQVNHA 527
            IAEE+GQI+ IG W+IEQAC Q+A W++ G+      R+AIN+S LQ      +E +  A
Sbjct: 854  IAEESGQIVAIGAWVIEQACAQHAAWRRDGL---GAIRVAINMSALQLRDGGLLEVLRGA 910

Query: 528  LRQAGITGEPIELEITESLLLENVESAIEKMAKLKESQISISIDDFGTGYSSLRYLKHLA 587
            +   G++   +E+E+TES L++  E ++ ++  LK   + +SIDDFGTGYSSL YL    
Sbjct: 911  IALYGVSPGDLEIELTESTLMDAAEQSLVQLHALKSLGVMLSIDDFGTGYSSLNYLNRFP 970

Query: 588  VDVLKIDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVIAEGVEDTSELAALKKLGCNQF 647
            +D LKIDRSF++++  D  D AI   I+ +   L L V+AEGVE   E   L+   C++ 
Sbjct: 971  IDKLKIDRSFIHKMLGDPTDMAIARAIIGLGHTLGLRVVAEGVERREEADTLRAARCDEL 1030

Query: 648  QGYLFDKPLRAEEIA 662
            QGYL  +P+ A ++A
Sbjct: 1031 QGYLISRPMPAGKLA 1045