Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 915 a.a., PAS domain S-box protein from Ralstonia solanacearum PSI07

 Score =  333 bits (855), Expect = 2e-95
 Identities = 185/460 (40%), Positives = 271/460 (58%), Gaps = 6/460 (1%)

Query: 202 TQRSPLPLRLTHDDELSELASTFQSMWKGKELAESKLNQLAYYDSLTGLANRSLLLQKLS 261
           T+ + +P+R   D   S +  +F  +   K  AE +L  LA +D+LTGL NRS  +  L 
Sbjct: 438 TRMNIIPIRRHGDAAPSSIMLSFADITDFKR-AEQRLRHLASHDALTGLTNRSFFIAHLE 496

Query: 262 DAIETAQNSHSTGVLFYLDLDRFKTINDSLGHTIGDQLIKAVALRMEAWTKNDYLSARIG 321
            AIE A++      LF+LDLDRFK++ND+ GH  GD L+++ A R+        + AR+G
Sbjct: 497 GAIERARDESRELALFFLDLDRFKSVNDTAGHACGDTLLQSAAARLTDCIGPGDVIARLG 556

Query: 322 GDEFAVLIPYLSPAKAEEV-AKQLLTLISNPYAVDDHQFYCTVSIGISVFPSVGSCNIDV 380
           GDEF +LI      K   + A++LL  +  P+   + ++Y  VSIG++++P  G    D+
Sbjct: 557 GDEFVILIEQRVEGKRIALLAERLLAAMREPFDTVNGRYYLGVSIGVALYPHDGISGTDL 616

Query: 381 LRQADTALYRAKASGRNKFMFYEPEMQAQVESFLEIEKGLHEALNQRQLELFYQPQVD-E 439
           LR AD A+YRAK +GRN+  FY  E+ A+++    +E  L +A + R+L+L YQP+ D  
Sbjct: 617 LRSADAAMYRAKQNGRNRAQFYTAELNARLQRRYLLENALRDACDNRELQLVYQPKYDLA 676

Query: 440 QHNIIGVEALIRWNHPKRGLLPPGVFMPIAEETGQILPIGNWIIEQACYQYAQWKKQGIL 499
            H I+G EAL+RWN  K G + P  F+P+AEETG I+PIG W++ +AC Q   W +   L
Sbjct: 677 SHRIVGAEALLRWNSVKLGAVSPVEFIPVAEETGLIVPIGEWVLRRACEQAVAWYQA--L 734

Query: 500 PPHFRRLAINISPLQFAQESFIEQVNHALRQAGITGEPIELEITESLLLENVESAIEKMA 559
              FR +A+N+S  QF     +  +   L + G+    +E+EITESLL+   +       
Sbjct: 735 GYDFR-MAVNLSARQFQTGDVVPMIEQTLAETGLPPTALEVEITESLLMGGADEVRPMFD 793

Query: 560 KLKESQISISIDDFGTGYSSLRYLKHLAVDVLKIDRSFVNQLHLDDNDQAIVDTILAIAR 619
            L    I ISIDDFGTGYSSL YL+   +  +KIDRSF+  +  D +  A+ + I+A+AR
Sbjct: 794 ALTAQGIRISIDDFGTGYSSLSYLQRFPISNVKIDRSFILGIPGDPDSVALTEAIVAMAR 853

Query: 620 KLNLEVIAEGVEDTSELAALKKLGCNQFQGYLFDKPLRAE 659
            L + V AEGVED  ++  L K GC + QGY   KP+ AE
Sbjct: 854 ALGMTVTAEGVEDADQVEFLAKAGCQEIQGYYIGKPVTAE 893