Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  361 bits (927), Expect = e-103
 Identities = 189/459 (41%), Positives = 291/459 (63%), Gaps = 11/459 (2%)

Query: 215  DELSELAS--TFQSMWKGKELAESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHS 272
            D+  +LAS   F +    ++ +E ++++LAYYD+LT L NR+L   +L +A++ A+   +
Sbjct: 812  DDEGDLASYVCFFTDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLYNALQQAERQKA 871

Query: 273  TGVLFYLDLDRFKTINDSLGHTIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIP-- 330
              VL +LDLDRFK INDSLGH  GD+++K +ALR+ A   +D   AR+GGDEF +L+   
Sbjct: 872  WVVLMFLDLDRFKPINDSLGHAAGDRMLKDMALRLLACVDDDDTVARMGGDEFTLLLQPR 931

Query: 331  ---YLSPAKAEEVAKQLLTLISNPYAVDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTA 387
                ++  +A  VA+ +L  +  P+ +++ +F+ T SIGI++ P  GS    +++ ADTA
Sbjct: 932  PTREMALNRAIHVAENILGSLVRPFVLENREFFVTASIGIALSPQDGSELSQLMKNADTA 991

Query: 388  LYRAKASGRNKFMFYEPEMQAQVESFLEIEKGLHEALNQRQLELFYQPQVD-EQHNIIGV 446
            +Y AK  G+N F FY+ EM A     LE+E  L  A+ Q +  L+YQPQ   +   + G 
Sbjct: 992  MYHAKERGKNNFQFYQAEMNASALERLELESDLRHAMEQNEFILYYQPQFSGDGKRLTGA 1051

Query: 447  EALIRWNHPKRGLLPPGVFMPIAEETGQILPIGNWIIEQACYQYAQWKKQGILPPHFRRL 506
            EAL+RW HP RGL+PPG F+P+ EE G ++ +G+W++ +A  Q   W K  +  P   ++
Sbjct: 1052 EALLRWRHPTRGLVPPGDFIPVIEELGLVVDVGDWVLREASRQLKAWHKAKVRVP---KV 1108

Query: 507  AINISPLQFAQESFIEQVNHALRQAGITGEPIELEITESLLLENVESAIEKMAKLKESQI 566
            ++NIS  QF+      ++ + L ++G+    +ELE+TES+L+  V  A++ +A LK   +
Sbjct: 1109 SVNISARQFSDGQLGTRIANILEESGLPPACLELELTESILMREVNEALQILASLKNLGL 1168

Query: 567  SISIDDFGTGYSSLRYLKHLAVDVLKIDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVI 626
            SI++DDFGTGYSSL YLK   +DVLKIDR+FV+ L   + D  I   I+A+A  LNL VI
Sbjct: 1169 SIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFVDGLPEGEQDAQIARAIIAMAHSLNLAVI 1228

Query: 627  AEGVEDTSELAALKKLGCNQFQGYLFDKPLRAEEIAQRF 665
            AEGVE   +L  L++ GC++ QGYLF +P+ A +   +F
Sbjct: 1229 AEGVETHEQLEFLREHGCDEVQGYLFGRPMPAHQFEAQF 1267