Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1247 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  343 bits (880), Expect = 3e-98
 Identities = 181/455 (39%), Positives = 279/455 (61%), Gaps = 6/455 (1%)

Query: 214  DDELSELASTFQSMWKGKELAESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHST 273
            D E++   + F  +   K  A++KL+  A++D LTGL NR+L   +L   +  AQ S+  
Sbjct: 780  DREITHFVAVFADISSIKH-AQAKLDYQAHHDPLTGLPNRTLFENRLQGVLTCAQVSNRQ 838

Query: 274  GVLFYLDLDRFKTINDSLGHTIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIPYL- 332
            G + +LDLDRFK INDSLGH +GD L+K +A R++   ++    AR+GGDEF +L+P L 
Sbjct: 839  GAVLFLDLDRFKHINDSLGHPVGDLLLKGIAQRLKEQVRDVDTVARLGGDEFIILLPGLH 898

Query: 333  SPAKAEEVAKQLLTLISNPYAVDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTALYRAK 392
             P+ A  +A +LL   + P+   +H+F+ + SIGIS++P  G+    ++R AD A+YR+K
Sbjct: 899  KPSDASTIANKLLACFNAPFQAGEHEFFTSASIGISLYPQDGTDVSTLIRNADAAMYRSK 958

Query: 393  ASGRNKFMFYEPEMQAQVESFLEIEKGLHEALNQRQLELFYQPQVD-EQHNIIGVEALIR 451
            A GRN+   Y  ++ AQ    + +E  L  A+ + ++ L +QP++  +  +++G EALIR
Sbjct: 959  AKGRNRVEAYTRDLTAQASERIALEHELRRAVERNEMSLCFQPKLSLKTQSLVGAEALIR 1018

Query: 452  WNHPKRGLLPPGVFMPIAEETGQILPIGNWIIEQACYQYAQWKKQGILPPHFRRLAINIS 511
            W+HP  G +PP  F+ +AEE G IL +G+W++EQAC Q   WK Q   P  F  L+IN++
Sbjct: 1019 WSHPTFGEVPPEHFIHLAEENGTILQLGDWVLEQACRQMQAWK-QHYQP--FGPLSINLA 1075

Query: 512  PLQFAQESFIEQVNHALRQAGITGEPIELEITESLLLENVESAIEKMAKLKESQISISID 571
              Q        ++   L+   +    ++LEITE+ ++   E A+  + +LK+  + ++ID
Sbjct: 1076 GAQLRHPHLARRIEQLLKHHQLKAGDLQLEITENFIMSQAEEALAVLYQLKKLGVQLAID 1135

Query: 572  DFGTGYSSLRYLKHLAVDVLKIDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVIAEGVE 631
            DFGTGYSSL YLK L +D+LKID+SF+  L  D +D AI   I+A+ R + L +IAEGVE
Sbjct: 1136 DFGTGYSSLSYLKRLPLDILKIDKSFIRGLPDDPHDAAIARAIIALGRSMQLTIIAEGVE 1195

Query: 632  DTSELAALKKLGCNQFQGYLFDKPLRAEEIAQRFV 666
            + ++   L   GC Q QGY+   PL  EE A  F+
Sbjct: 1196 NQAQQRFLAAEGCEQIQGYIVSLPLPPEEFAAAFL 1230