Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 994 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  358 bits (918), Expect = e-103
 Identities = 189/439 (43%), Positives = 275/439 (62%), Gaps = 12/439 (2%)

Query: 231 KELAESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHSTGVLFYLDLDRFKTINDS 290
           ++ AE  +  LA+YD+LT L NR LLL +L  A+  +  S   G L ++DLD FK +ND+
Sbjct: 545 RKTAEDMIRHLAFYDALTDLPNRQLLLDRLQQALAASARSGQHGALMFIDLDNFKILNDT 604

Query: 291 LGHTIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIPYLSPA------KAEEVAKQL 344
           LGH +GDQL++ VA R+    +   + AR+GGDEF V++  LS        KA  +A+++
Sbjct: 605 LGHHMGDQLLQKVAARLTRSVRKTDMVARLGGDEFVVMVDDLSTDPDAAAFKATALAEKV 664

Query: 345 LTLISNPYAVDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTALYRAKASGRNKFMFYEP 404
           L  +  P+ +  HQ + T SIG++ F    S   ++L+QAD A+Y+AK+ GRN   F++P
Sbjct: 665 LNTLREPFQLTGHQHFATPSIGVTSFNGQQSDVGELLKQADLAMYQAKSLGRNTLCFFDP 724

Query: 405 EMQAQVESFLEIEKGLHEALNQRQLELFYQPQVDEQHNIIGVEALIRWNHPKRGLLPPGV 464
            M A V +   +   L  AL+++Q  + YQPQVD    I GVEAL+RW HP+RGL+ P  
Sbjct: 725 NMAATVSANATVSSDLRVALSEQQFVVHYQPQVDRVGVITGVEALVRWQHPQRGLIFPAD 784

Query: 465 FMPIAEETGQILPIGNWIIEQACYQYAQWKKQGILPPHFRRL--AINISPLQFAQESFIE 522
           F+P+AE+TG ILP+G W++E++C Q A W  +    P    L  A+N+S  QF    F++
Sbjct: 785 FIPVAEDTGLILPLGQWVLEKSCEQLAAWADR----PQTANLSIAVNVSVRQFRHPDFVD 840

Query: 523 QVNHALRQAGITGEPIELEITESLLLENVESAIEKMAKLKESQISISIDDFGTGYSSLRY 582
            V  A+ + GI    ++LE+TESLL + +E  I+KM  LK   +++S+DDFG GYSSL  
Sbjct: 841 MVMAAITRTGIRPHKLKLELTESLLADRMEITIDKMGMLKALGVTLSLDDFGVGYSSLSV 900

Query: 583 LKHLAVDVLKIDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVIAEGVEDTSELAALKKL 642
           LK L +D LKID+ FV  +  D ND AI   I+A+A+ L+L+V+AEGVE   +   L   
Sbjct: 901 LKRLPLDQLKIDKGFVADVLTDPNDAAISRAIIALAQSLSLQVVAEGVETQEQRDFLAYQ 960

Query: 643 GCNQFQGYLFDKPLRAEEI 661
           GC+QFQG+LF KPL  E +
Sbjct: 961 GCDQFQGHLFAKPLPIEAL 979