Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 861 a.a., hypothetical protein from Methylophilus sp. DMC18

 Score =  332 bits (852), Expect = 3e-95
 Identities = 187/457 (40%), Positives = 270/457 (59%), Gaps = 13/457 (2%)

Query: 214 DDELSELASTFQSMWKGKEL--AESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSH 271
           D+  ++LA   QS+    E   AE+KL  LA++D LTGL NR LL ++    I  A    
Sbjct: 402 DELANDLAFGIQSLRIRAEHRDAETKLEYLAHHDPLTGLPNRLLLRKRFEQFIHQANKRE 461

Query: 272 STGVLFYLDLDRFKTINDSLGHTIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIPY 331
               + +LD+D FK INDS GH IGD L+K V  R+E       + +R GGDEF +LI  
Sbjct: 462 YGLAMLFLDMDNFKEINDSFGHAIGDALLKEVVRRLERMLSEACMLSREGGDEFVLLI-- 519

Query: 332 LSPAKAEEV----AKQLLTLISNPYAVDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTA 387
            + A+A ++    A+Q+L  +  P+ V  +  + + SIGIS++P+ G     + + AD A
Sbjct: 520 -NNAQASDIVTQTAQQILNAMQEPFEVSGNTLHASFSIGISLYPNDGKDFETLRKNADAA 578

Query: 388 LYRAKASGRNKFMFYEPEMQAQVESFLEIEKGLHEALNQRQLELFYQPQVD-EQHNIIGV 446
           LY AK  GRN + F+  +M A  +  + I+  LH AL   +  L YQPQ+      I G+
Sbjct: 579 LYLAKDCGRNTYRFFVTQMNADAQKRMRIQTDLHTALKNNEFLLHYQPQIRLSDGRISGI 638

Query: 447 EALIRWNHPKRGLLPPGVFMPIAEETGQILPIGNWIIEQACYQYAQWKKQGILPPHFRRL 506
           EALIRW +    +LPP  F+PIAE++G I+ +G W++ +AC Q A W KQG        +
Sbjct: 639 EALIRWQNADGQMLPPSEFIPIAEQSGLIIQMGQWVLREACRQLAAWHKQGQTQ---LVV 695

Query: 507 AINISPLQFAQESFIEQVNHALRQAGITGEPIELEITESLLLENVESAIEKMAKLKESQI 566
           A+N+S  QF   + +E ++ AL   G+  + +ELE+TES+L+++ ES I  +  LK   +
Sbjct: 696 AVNLSSHQFRHGNIVETISSALNDFGLPPQCLELELTESILIQDTESVISTLHTLKHIGV 755

Query: 567 SISIDDFGTGYSSLRYLKHLAVDVLKIDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVI 626
            ++IDDFGTGYSSL YLK L+VD LKID+SF+  LH D +   IV  I+ +   L L VI
Sbjct: 756 KLAIDDFGTGYSSLSYLKRLSVDKLKIDKSFIRDLHKDQDSAEIVRAIIQLGHILQLTVI 815

Query: 627 AEGVEDTSELAALKKLGCNQFQGYLFDKPLRAEEIAQ 663
           AEGVE   +LA L    C++ QGYLF +P+ AE I +
Sbjct: 816 AEGVETEQQLAFLTDSHCDEIQGYLFSRPVAAEYIPE 852