Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 979 a.a., hypothetical protein from Methylophilus sp. DMC18

 Score =  336 bits (862), Expect = 3e-96
 Identities = 182/464 (39%), Positives = 275/464 (59%), Gaps = 6/464 (1%)

Query: 213 HDDELSELASTFQSMWKGKELAESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHS 272
           H + ++     F  + + K  ++ +LN L  +D LTGL NR L+    + AI+ +  +  
Sbjct: 517 HANAITNYVGVFADISEMKR-SQRQLNSLVNHDPLTGLPNRRLINHLFAHAIQRSGRNEQ 575

Query: 273 TGVLFYLDLDRFKTINDSLGHTIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIPYL 332
              + ++DLDRFK INDSLGH  GDQL+ +V  R+    +   +  R+GGDEF +++  L
Sbjct: 576 QAAILFIDLDRFKNINDSLGHYAGDQLLLSVTERLRQAVRESDIVGRLGGDEFIIMLENL 635

Query: 333 -SPAKAEEVAKQLLTLISNPYAVDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTALYRA 391
            S A A + A  +L  +   + +D HQ + + SIGIS++P  G     +++ AD A+Y+ 
Sbjct: 636 RSKADASQKAHDILEALRVEFNIDHHQIFVSGSIGISMYPQDGQDVESLIKAADLAMYQV 695

Query: 392 KASGRNKFMFYEPEMQAQVESFLEIEKGLHEALNQRQLELFYQPQVDEQHN-IIGVEALI 450
           K +G+N   FY+  +        ++E  L +ALN+ QL +FYQ Q+D +   IIG EALI
Sbjct: 696 KNNGKNHVAFYDAALSRDAVEHFQLETELRQALNKNQLNMFYQAQIDLKTGMIIGAEALI 755

Query: 451 RWNHPKRGLLPPGVFMPIAEETGQILPIGNWIIEQACYQYAQWKKQGILPPHFRRLAINI 510
           RW HP +G++ P  F+P+AEETG IL IG W + Q+  Q   W +Q    P F+++AIN+
Sbjct: 756 RWMHPTQGIISPAKFIPLAEETGLILSIGEWALAQSVRQAHAWHQQH---PEFKKIAINV 812

Query: 511 SPLQFAQESFIEQVNHALRQAGITGEPIELEITESLLLENVESAIEKMAKLKESQISISI 570
           S +Q  +  F + V   L ++      IELEITES L+++ +  ++   +LK   ISI+I
Sbjct: 813 SAVQIMKSKFADTVYGILMESECDPSIIELEITESTLMQHTQHVVDTFNQLKLLGISIAI 872

Query: 571 DDFGTGYSSLRYLKHLAVDVLKIDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVIAEGV 630
           DDFGTGYSSL +LK L +D +KIDRSFV  L  D +D AI   I A+A +L   V+AEGV
Sbjct: 873 DDFGTGYSSLSHLKRLPLDQIKIDRSFVKDLPNDKDDAAITSAIYAMATQLGFTVVAEGV 932

Query: 631 EDTSELAALKKLGCNQFQGYLFDKPLRAEEIAQRFVSNSYRKIQ 674
           E   +   L++LGC   QGYL+  P+ A++  +    N+ RKI+
Sbjct: 933 ETEEQEKFLQRLGCQTAQGYLYAYPVNADDFVKLLTLNNQRKIK 976