Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1229 a.a., hypothetical protein from Methylophilus sp. DMC18

 Score =  363 bits (933), Expect = e-104
 Identities = 214/610 (35%), Positives = 352/610 (57%), Gaps = 31/610 (5%)

Query: 83   PGIFKVEIVDDFGDVM---TRKEKAISEQSQLVSVLASYLTPAVSVFSAELHQPNSNVVV 139
            P   ++++V+ +  ++     +E+A  EQ +L+    S L   V +  A +H P    +V
Sbjct: 633  PETAELDMVESYAHILGLAIEREQA-DEQLKLLQSGVSRLNDMVMITEAPVHTPLQQKIV 691

Query: 140  GKLSFYIDGSSIAKVFIAKTTRVLLFDLLRNTLLTTILLLF---FYQKLSRPITMLITWV 196
                 +   + I  + + +   +  F+L +N+     L      + Q+L  PI   +  V
Sbjct: 692  FLNEAF---TRITGLAVDQYNHLSPFELFKNSTPANDLQRIKEAWQQQL--PIKTEVVTV 746

Query: 197  NSLND---TQRSPLPLRLTHDDE--LSELASTFQSMWKGKELAESKLNQLAYYDSLTGLA 251
            +   +    +   LPL   HD    ++   +  + + + K   ++++ QLAYYD++TGL 
Sbjct: 747  DHQGNGISLEMDALPL---HDKRGRVTHWVAVLRDISERKR-TDAQIRQLAYYDTMTGLP 802

Query: 252  NRSLLLQKLSDAIETAQNSHSTGVLFYLDLDRFKTINDSLGHTIGDQLIKAVALRMEAWT 311
            NR LL  +L+  I  +Q   + G L ++D+D FKT+ND+ GH +GD L+  VA R++   
Sbjct: 803  NRLLLQDRLAAHIHKSQLKKTGGALMFIDIDNFKTLNDTHGHAVGDALLIEVAKRIKHSV 862

Query: 312  KNDYLSARIGGDEFAVLIPYLSPA------KAEEVAKQLLTLISNPYAVDDHQFYCTVSI 365
            +     +R+GGDEF V++  LS A      +A ++ ++++     P+ +D +Q Y T SI
Sbjct: 863  RRQDTVSRLGGDEFVVVLDSLSSAADQAEKQARKICEKIVGAFKKPFKLDHYQHYTTPSI 922

Query: 366  GISVFPSVGSCNIDVLRQADTALYRAKASGRNKFMFYEPEMQAQVESFLEIEKGLHEALN 425
            G+ +F    S   ++LR+AD A+Y+AK +GRN + F++ +M+ ++   + +E  LHEA+ 
Sbjct: 923  GVVLFDPDMSQTDELLRRADMAMYKAKEAGRNGYRFFDVQMETELRQRVALEAELHEAIQ 982

Query: 426  QRQLELFYQPQVDEQHNIIGVEALIRWNHPKRGLLPPGVFMPIAEETGQILPIGNWIIEQ 485
            +R+  L  QPQ + QH ++G EAL+RW HP+RGL+ PG F+ +AE +GQI+ +G W+++Q
Sbjct: 983  KREFVLHLQPQYNRQHQMVGAEALLRWQHPERGLIMPGEFIALAEASGQIVALGRWVLQQ 1042

Query: 486  ACYQYAQWKKQGILPPHFRRLAINISPLQFAQESFIEQVNHALRQAGITGEPIELEITES 545
            AC    QW     L      LA+N+SP Q+ Q +F+ +V   L +A I    ++LE+TES
Sbjct: 1043 ACALLQQWAFHPQLSQMV--LAVNVSPKQYLQSAFVTEVQQLLTEANIAPGRLQLELTES 1100

Query: 546  LLLENVESAIEKMAKLKESQISISIDDFGTGYSSLRYLKHLAVDVLKIDRSFVNQLHLDD 605
            +L++NVE  I KM  LK + +S S+DDFGTGYSSL YLK    D LKID+SFV  +    
Sbjct: 1101 MLIDNVEDIIAKMTALKAAGVSFSLDDFGTGYSSLSYLKRFPFDQLKIDQSFVRDMLQGQ 1160

Query: 606  NDQAIVDTILAIARKLNLEVIAEGVEDTSELAALKKLGCNQFQGYLFDKPLRAEEIAQRF 665
            + Q+IV+ I+++   L L+V+AEGVE  ++L  L +LGCN FQGY F  P R ++  +R 
Sbjct: 1161 DHQSIVNAIISLGISLQLDVLAEGVETEAQLDLLTRLGCNTFQGYYFSVPQRTQDF-ERL 1219

Query: 666  VSNSYRKIQT 675
            V+   R + T
Sbjct: 1220 VATG-RSVMT 1228