Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1510 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  331 bits (848), Expect = 2e-94
 Identities = 173/431 (40%), Positives = 259/431 (60%), Gaps = 4/431 (0%)

Query: 234  AESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHSTGVLFYLDLDRFKTINDSLGH 293
            ++ ++  LA +D LTG+ NRSLL+ +L  A+  A+   +   + ++DLD FK INDSLGH
Sbjct: 1068 SQRRIEFLATHDELTGIPNRSLLMDRLKHAVAQAKRQKTKLAVLFIDLDNFKVINDSLGH 1127

Query: 294  TIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIPYLSPAKAEEVAKQLLTLISNPYA 353
             +GDQL+K    R++   ++    AR+GGDEF  ++  +S  K   VA +++  +   ++
Sbjct: 1128 DVGDQLLKQATERLKHCVRDSDTLARLGGDEFVAVLTDVSLEKVNSVAARIVDFLGASFS 1187

Query: 354  VDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTALYRAKASGRNKFMFYEPEMQAQVESF 413
            ++D   + + SIGISVFP  G  ++ +L+ ADTA+YRAK  GRN++ F+  EM+      
Sbjct: 1188 INDKSLFVSASIGISVFPDDGQDSLTLLKHADTAMYRAKERGRNQYQFFADEMKVIALQR 1247

Query: 414  LEIEKGLHEALNQRQLELFYQPQVD-EQHNIIGVEALIRWNHPKRGLLPPGVFMPIAEET 472
            L +E GL  AL  +   + YQPQVD     ++G EAL+RW  P  G + P  F+PIAE  
Sbjct: 1248 LTLETGLRLALETKSFRMCYQPQVDIHTGEVVGAEALLRWRDPTLGEVSPAHFIPIAESC 1307

Query: 473  GQILPIGNWIIEQACYQYAQWKKQGILPPHFRRLAINISPLQFAQESFIEQVNHALRQAG 532
            G I  IG  +      Q A W+++G+  P   R+AIN+S  Q     F  +V   L  +G
Sbjct: 1308 GLIGAIGETVFTMVLEQIAYWREKGLTVP---RIAINVSAHQLRDAGFAAKVGSWLDSSG 1364

Query: 533  ITGEPIELEITESLLLENVESAIEKMAKLKESQISISIDDFGTGYSSLRYLKHLAVDVLK 592
            I+ E I +E+TES L+E ++   E +       + +SIDDFGTGYSSL YLK L +  LK
Sbjct: 1365 ISSELIGIELTESALMERIDMVKEMLTSFDGMGMKVSIDDFGTGYSSLSYLKKLPIHELK 1424

Query: 593  IDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVIAEGVEDTSELAALKKLGCNQFQGYLF 652
            IDRSFV+ + L+ +D++I   I+ ++R L + V+AEGVE   +L  LK+ GC+  QGYLF
Sbjct: 1425 IDRSFVDGIALERDDRSIAKAIIDMSRALGMRVVAEGVESEEQLGVLKEEGCDMVQGYLF 1484

Query: 653  DKPLRAEEIAQ 663
             +PL  E  A+
Sbjct: 1485 HRPLSPEAFAK 1495