Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1090 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  325 bits (833), Expect = 7e-93
 Identities = 179/433 (41%), Positives = 264/433 (60%), Gaps = 10/433 (2%)

Query: 235  ESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHSTGV-LFYLDLDRFKTINDSLGH 293
            E ++  LA +D LT L NR LL  +L  A+  A   H T V L ++DLDRFKTINDSLGH
Sbjct: 646  EERIRHLAQFDFLTDLPNRFLLRDRLERAM-LAAGRHGTRVGLLFVDLDRFKTINDSLGH 704

Query: 294  TIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIPYLS-PAKAEEVAKQLLTLISNPY 352
             +GD L++ VA R+ A  +     +R GGDEF +LI  +  P  A  VA+++L  +S PY
Sbjct: 705  QVGDDLLREVAGRLTATVRASDTVSRQGGDEFIILINDMDGPDAAGIVARKVLHALSEPY 764

Query: 353  AVDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTALYRAKASGRNKFMFYEPEMQAQVES 412
             +D H+   T SIGI+++P  G+    +L+ AD A+Y AK +GR  + F+ PE+  +   
Sbjct: 765  LIDGHELQVTPSIGIAIYPDDGTGIDGLLKSADMAMYAAKEAGRATYQFFTPELNRRASD 824

Query: 413  FLEIEKGLHEALNQRQLELFYQPQVD-EQHNIIGVEALIRWNHPKRGLLPPGVFMPIAEE 471
             +  E  L  AL   +LEL +QPQ   +   +IG EAL+RW  P   L+ PG F+P+AE+
Sbjct: 825  RMWTESNLRRALANNELELHFQPQFSMDGRRLIGAEALVRWRQPDGTLIMPGQFIPVAED 884

Query: 472  TGQILPIGNWIIEQACYQYAQWKKQGILPPHFRRLAINISPLQFAQESFIEQVNHALRQA 531
            TG ILP+G+W++ +AC + A+     +L  H   +A+N+S +Q  +    E+V   L   
Sbjct: 885  TGLILPLGDWVLGEACRRAAE-----LLRHHDLLIAVNLSAVQVRRPGLAERVAGWLSAY 939

Query: 532  GITGEPIELEITESLLLENVESAIEKMAKLKESQISISIDDFGTGYSSLRYLKHLAVDVL 591
            GI    +ELE+TES+L++  +   E  A+L+E  + ++IDDFGTGYSSL YLK   VD L
Sbjct: 940  GIPPSALELEVTESVLMDESDVVSETFARLRELGVPVAIDDFGTGYSSLAYLKRFRVDKL 999

Query: 592  KIDRSFVNQLHLDDNDQ-AIVDTILAIARKLNLEVIAEGVEDTSELAALKKLGCNQFQGY 650
            KIDRSFV+ L   + D  AI + ++ +AR L ++ +AEGVE   +   L ++GC+Q QGY
Sbjct: 1000 KIDRSFVSGLRAGNPDSGAIAEAVIGMARSLRMQTLAEGVETEEQYGCLAEMGCDQCQGY 1059

Query: 651  LFDKPLRAEEIAQ 663
            L  +P+  E+  +
Sbjct: 1060 LLGRPMPYEDFLE 1072



 Score = 26.6 bits (57), Expect = 0.007
 Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 10/69 (14%)

Query: 17 SVFLVSVL---LGLCFSFYHTLS---DLHQEQSKVQEHYNFKLVQSYENA-SQAAY---H 66
          S+ LVS L   LG  F + H      DL Q +++  E  +  LVQ  ENA S  AY    
Sbjct: 29 SMALVSALVLGLGFYFVWQHWADLEHDLQQSEARYVEEQHQALVQEVENAQSYLAYMRSR 88

Query: 67 LNNLLAEQV 75
          +  LL EQ+
Sbjct: 89 VEPLLKEQL 97