Pairwise Alignments

Query, 684 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 698 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  306 bits (785), Expect = 2e-87
 Identities = 174/447 (38%), Positives = 259/447 (57%), Gaps = 10/447 (2%)

Query: 226 TSLLGNQSQLILLQDADEAPKQFSATTQVDAHIDSLTGLYNRHGFTKRLEQCIQNETP-- 283
           TSLL  + +      AD         T +  H D LTGL NR     R++Q +Q      
Sbjct: 234 TSLLDARLEARTAVLADSLTLANQELTHLALH-DMLTGLPNRTLLADRIQQAMQVVKEQG 292

Query: 284 --LVMLYLDIDNFKNINDSLGHHIGDKVIKEVAARLKRLLPQQAVLGHLGGDEFGLI--L 339
               ++++D+D FK +ND+ GHH+GD++++EV  RL+  L  Q  L  +GGDEF L+  L
Sbjct: 293 GCFALMFIDLDGFKPVNDAFGHHMGDQLLREVGLRLREDLRSQDTLARIGGDEFVLLVQL 352

Query: 340 PEPEHNRSAEMLADRIISLINQPFDLHHFSKRLACSIGSVRYPGDGNDARVLLQNADTAM 399
            +P+    A  LA+R + LIN+ F +     +++ S+G   +PG+G++ + LL NAD AM
Sbjct: 353 TQPD---DALGLAERQVILINRAFQVAEHELKISASVGIAMFPGNGHNPQELLMNADAAM 409

Query: 400 YEAKERGRNRLIKFNDQMNKEARMRLWLEIELQKALQQNGLEVWYQPKVNARDFSINGAE 459
           Y AK  G+N    F+  MN  AR +L L  +L+ A++Q    ++YQPK +A      GAE
Sbjct: 410 YHAKGMGKNGYSFFDASMNTNARKQLQLLQDLRNAVEQEQFRLYYQPKCDAVSGIPVGAE 469

Query: 460 ALVRWKHPVEGYISPGAFIPVAEKAGLIEHLGRVVMREVFATVKRWKLQGILPGRVAINI 519
           AL+RW+HP +G + P  FI +AEK GLI  +G  V+ E    +  W  QG    R+A+N+
Sbjct: 470 ALLRWEHPQQGLLLPAMFIELAEKTGLIIPIGEWVLNEACRQMSLWYAQGYEDWRIAVNL 529

Query: 520 SPEQFGNPQLIDYLEKLLRTTGLDPNNITFELTESAVMSDSEHTQQMLNAIKKLGFTLSI 579
           S  QF +  L+  +   L    L  NN+T E+TE+  MSD++ +  +L  +  +G  LSI
Sbjct: 530 SALQFCHAGLVKSVADALERHQLPANNLTLEITETTAMSDADASMTVLQQLSDMGVDLSI 589

Query: 580 DDFGTGYSSLAYLARFPIDELKIDRAFISNIDTLPKQLTVIENIINLGRSLNLTVVAEGV 639
           DDFGTGYSSL YL R P +ELKIDR F+ +++       ++  I+ LG++L L +VAEGV
Sbjct: 590 DDFGTGYSSLMYLKRLPANELKIDRGFVRDLEHDSDDAAIVSAIVALGQALGLRIVAEGV 649

Query: 640 ETQQQATLLSNLNCHSIQGFHFYRPQP 666
           ET  Q + L+ L C+S+QG+    P P
Sbjct: 650 ETDVQQSFLTRLGCNSLQGYLLGHPLP 676