Pairwise Alignments

Query, 684 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  318 bits (815), Expect = 1e-90
 Identities = 174/428 (40%), Positives = 254/428 (59%), Gaps = 8/428 (1%)

Query: 256  AHIDSLTGLYNRHGFTKRLEQCIQN----ETPLVMLYLDIDNFKNINDSLGHHIGDKVIK 311
            A+ D+LT L NR  F  RL   +Q     +  +V+++LD+D FK INDSLGH  GD+++K
Sbjct: 841  AYYDALTHLPNRTLFQDRLYNALQQAERQKAWVVLMFLDLDRFKPINDSLGHAAGDRMLK 900

Query: 312  EVAARLKRLLPQQAVLGHLGGDEFGLIL-PEPEHNRS---AEMLADRIISLINQPFDLHH 367
            ++A RL   +     +  +GGDEF L+L P P    +   A  +A+ I+  + +PF L +
Sbjct: 901  DMALRLLACVDDDDTVARMGGDEFTLLLQPRPTREMALNRAIHVAENILGSLVRPFVLEN 960

Query: 368  FSKRLACSIGSVRYPGDGNDARVLLQNADTAMYEAKERGRNRLIKFNDQMNKEARMRLWL 427
                +  SIG    P DG++   L++NADTAMY AKERG+N    +  +MN  A  RL L
Sbjct: 961  REFFVTASIGIALSPQDGSELSQLMKNADTAMYHAKERGKNNFQFYQAEMNASALERLEL 1020

Query: 428  EIELQKALQQNGLEVWYQPKVNARDFSINGAEALVRWKHPVEGYISPGAFIPVAEKAGLI 487
            E +L+ A++QN   ++YQP+ +     + GAEAL+RW+HP  G + PG FIPV E+ GL+
Sbjct: 1021 ESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWRHPTRGLVPPGDFIPVIEELGLV 1080

Query: 488  EHLGRVVMREVFATVKRWKLQGILPGRVAINISPEQFGNPQLIDYLEKLLRTTGLDPNNI 547
              +G  V+RE    +K W    +   +V++NIS  QF + QL   +  +L  +GL P  +
Sbjct: 1081 VDVGDWVLREASRQLKAWHKAKVRVPKVSVNISARQFSDGQLGTRIANILEESGLPPACL 1140

Query: 548  TFELTESAVMSDSEHTQQMLNAIKKLGFTLSIDDFGTGYSSLAYLARFPIDELKIDRAFI 607
              ELTES +M +     Q+L ++K LG ++++DDFGTGYSSL YL +FPID LKIDR F+
Sbjct: 1141 ELELTESILMREVNEALQILASLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFV 1200

Query: 608  SNIDTLPKQLTVIENIINLGRSLNLTVVAEGVETQQQATLLSNLNCHSIQGFHFYRPQPK 667
              +    +   +   II +  SLNL V+AEGVET +Q   L    C  +QG+ F RP P 
Sbjct: 1201 DGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLREHGCDEVQGYLFGRPMPA 1260

Query: 668  HEVEELFA 675
            H+ E  F+
Sbjct: 1261 HQFEAQFS 1268