Pairwise Alignments

Query, 684 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1247 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  309 bits (791), Expect = 6e-88
 Identities = 172/433 (39%), Positives = 250/433 (57%), Gaps = 4/433 (0%)

Query: 246  KQFSATTQVDAHIDSLTGLYNRHGFTKRLE---QCIQ-NETPLVMLYLDIDNFKNINDSL 301
            K   A     AH D LTGL NR  F  RL+    C Q +     +L+LD+D FK+INDSL
Sbjct: 797  KHAQAKLDYQAHHDPLTGLPNRTLFENRLQGVLTCAQVSNRQGAVLFLDLDRFKHINDSL 856

Query: 302  GHHIGDKVIKEVAARLKRLLPQQAVLGHLGGDEFGLILPEPEHNRSAEMLADRIISLINQ 361
            GH +GD ++K +A RLK  +     +  LGGDEF ++LP       A  +A+++++  N 
Sbjct: 857  GHPVGDLLLKGIAQRLKEQVRDVDTVARLGGDEFIILLPGLHKPSDASTIANKLLACFNA 916

Query: 362  PFDLHHFSKRLACSIGSVRYPGDGNDARVLLQNADTAMYEAKERGRNRLIKFNDQMNKEA 421
            PF         + SIG   YP DG D   L++NAD AMY +K +GRNR+  +   +  +A
Sbjct: 917  PFQAGEHEFFTSASIGISLYPQDGTDVSTLIRNADAAMYRSKAKGRNRVEAYTRDLTAQA 976

Query: 422  RMRLWLEIELQKALQQNGLEVWYQPKVNARDFSINGAEALVRWKHPVEGYISPGAFIPVA 481
              R+ LE EL++A+++N + + +QPK++ +  S+ GAEAL+RW HP  G + P  FI +A
Sbjct: 977  SERIALEHELRRAVERNEMSLCFQPKLSLKTQSLVGAEALIRWSHPTFGEVPPEHFIHLA 1036

Query: 482  EKAGLIEHLGRVVMREVFATVKRWKLQGILPGRVAINISPEQFGNPQLIDYLEKLLRTTG 541
            E+ G I  LG  V+ +    ++ WK      G ++IN++  Q  +P L   +E+LL+   
Sbjct: 1037 EENGTILQLGDWVLEQACRQMQAWKQHYQPFGPLSINLAGAQLRHPHLARRIEQLLKHHQ 1096

Query: 542  LDPNNITFELTESAVMSDSEHTQQMLNAIKKLGFTLSIDDFGTGYSSLAYLARFPIDELK 601
            L   ++  E+TE+ +MS +E    +L  +KKLG  L+IDDFGTGYSSL+YL R P+D LK
Sbjct: 1097 LKAGDLQLEITENFIMSQAEEALAVLYQLKKLGVQLAIDDFGTGYSSLSYLKRLPLDILK 1156

Query: 602  IDRAFISNIDTLPKQLTVIENIINLGRSLNLTVVAEGVETQQQATLLSNLNCHSIQGFHF 661
            ID++FI  +   P    +   II LGRS+ LT++AEGVE Q Q   L+   C  IQG+  
Sbjct: 1157 IDKSFIRGLPDDPHDAAIARAIIALGRSMQLTIIAEGVENQAQQRFLAAEGCEQIQGYIV 1216

Query: 662  YRPQPKHEVEELF 674
              P P  E    F
Sbjct: 1217 SLPLPPEEFAAAF 1229



 Score = 29.6 bits (65), Expect = 0.001
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 107 DRVQYLVFHAIDTSEKQILVRSLEESESKYALLTTLLPDGLMM--VENDCIISANPSAAR 164
           D    LV    D S+ +   + L+ SE K+A      PDGL++    +  ++  N    R
Sbjct: 534 DGTPALVVAVRDISQLKETQQQLQTSEEKFAKAFHASPDGLLLSRQSDGLLLEVNEGFCR 593

Query: 165 LLGFD 169
           L G+D
Sbjct: 594 LTGYD 598