Pairwise Alignments

Query, 684 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1247 a.a., EAL domain-containing protein from Pseudomonas sp. SVBP6

 Score =  316 bits (810), Expect = 4e-90
 Identities = 173/433 (39%), Positives = 255/433 (58%), Gaps = 4/433 (0%)

Query: 246  KQFSATTQVDAHIDSLTGLYNRHGFTKRLE---QCIQ-NETPLVMLYLDIDNFKNINDSL 301
            K   A     AH D LTGL NR  F  RL+    C Q ++    +L+LD+D FK+INDSL
Sbjct: 797  KHAQAKLDYQAHHDPLTGLPNRTLFESRLQAALNCAQASQRQGAVLFLDLDRFKHINDSL 856

Query: 302  GHHIGDKVIKEVAARLKRLLPQQAVLGHLGGDEFGLILPEPEHNRSAEMLADRIISLINQ 361
            GH +GD ++K +A RLK  +     +  LGGDEF ++LP       A  +A ++++    
Sbjct: 857  GHPVGDLLLKAIAQRLKDQVRDIDTVARLGGDEFIILLPGLHQPSDAGHIAHKLLACFGA 916

Query: 362  PFDLHHFSKRLACSIGSVRYPGDGNDARVLLQNADTAMYEAKERGRNRLIKFNDQMNKEA 421
            PF         + SIG+  YP DG D   L++NAD AMY +K +GRNR+  +   +  +A
Sbjct: 917  PFQAGEHEFFTSASIGTSLYPQDGTDVASLIRNADAAMYRSKAKGRNRVESYTRDLTAQA 976

Query: 422  RMRLWLEIELQKALQQNGLEVWYQPKVNARDFSINGAEALVRWKHPVEGYISPGAFIPVA 481
              R+ LE EL++A+++N L + YQPK + +  S+ GAEAL+RW HP  G + P  FIP+A
Sbjct: 977  SERIALEHELRRAIERNELSLCYQPKFSLKTQSLVGAEALIRWTHPSFGDVPPEHFIPLA 1036

Query: 482  EKAGLIEHLGRVVMREVFATVKRWKLQGILPGRVAINISPEQFGNPQLIDYLEKLLRTTG 541
            E+ G+I  LG  V+ +    ++ WK   +  G +++N++  Q   P L+  +E+LL+T  
Sbjct: 1037 EENGMILQLGDWVLEQACQQMQAWKHDYLAFGPLSVNLAGAQLRQPSLVKRIEQLLKTHQ 1096

Query: 542  LDPNNITFELTESAVMSDSEHTQQMLNAIKKLGFTLSIDDFGTGYSSLAYLARFPIDELK 601
            L   ++  E+TE+ +MS +E    +L+ +K+LG  L+IDDFGTGYSSL+YL R P+D LK
Sbjct: 1097 LKAGDLQLEITENFIMSQAEEALAILHQLKQLGVQLAIDDFGTGYSSLSYLKRLPLDILK 1156

Query: 602  IDRAFISNIDTLPKQLTVIENIINLGRSLNLTVVAEGVETQQQATLLSNLNCHSIQGFHF 661
            ID++FI  +   P    +   II LGRS+ LT++AEGVE+Q Q   L+   C  IQG+  
Sbjct: 1157 IDQSFIRGLPDDPHDAAIARAIIALGRSMQLTIIAEGVESQAQQQFLAAEGCEQIQGYIV 1216

Query: 662  YRPQPKHEVEELF 674
              P P  E    F
Sbjct: 1217 SLPLPAGEFAATF 1229



 Score = 30.8 bits (68), Expect = 4e-04
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 107 DRVQYLVFHAIDTSEKQILVRSLEESESKYALLTTLLPDGLMM--VENDCIISANPSAAR 164
           D    LV    D S+ +     L+ SE K+A      PDGL++    +  +I  N    R
Sbjct: 534 DSTPALVVAVRDISQLKETQEQLQTSEEKFAKAFHASPDGLLLSRQSDGLLIEVNEGFCR 593

Query: 165 LLGFDDAQKL 174
           L G+D    L
Sbjct: 594 LTGYDTHMSL 603



 Score = 29.6 bits (65), Expect = 0.001
 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 3/70 (4%)

Query: 117 IDTSEKQILVRSLEESESKYALLTTLLPDGLMM--VENDCIISANPSAARLLGFDDAQKL 174
           ID SE +    +L  SE K+A +    PD L++  + + C++  N +    +G   AQ +
Sbjct: 420 IDISETKNAEEALRLSEQKFASVFQQCPDILVIARMSDGCLLEVNEAFEEQIGLSPAQ-V 478

Query: 175 LGENLSRLFI 184
           LG   + L I
Sbjct: 479 LGRTATELNI 488