Pairwise Alignments

Query, 684 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 703 a.a., GGDEF domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  313 bits (802), Expect = 2e-89
 Identities = 174/439 (39%), Positives = 263/439 (59%), Gaps = 5/439 (1%)

Query: 230 GNQSQLILLQDADEAPKQFSATTQVDAHIDSLTGLYNRHGFTKRLEQCI----QNETPLV 285
           G   + +LL       ++     +  A  D+LT L NRH   + L + I    Q    L 
Sbjct: 247 GEDGRFVLLLRDITRKRRDEQRIRFHASHDALTRLPNRHTVMEALGEAIVRAEQTGERLA 306

Query: 286 MLYLDIDNFKNINDSLGHHIGDKVIKEVAARLKRLLPQQAVLGHLGGDEFGLILPEPEHN 345
           +LYLD++ FK+INDS GH +GD+++++VA RLK  +    V+G LGGDEF ++LP    +
Sbjct: 307 VLYLDVNRFKDINDSYGHAVGDELLRQVARRLKACVRASDVIGRLGGDEFVMLLPSVGDH 366

Query: 346 RSAEMLADRIISLINQPFDLHHFSKRLACSIGSVRYPGDGNDARVLLQNADTAMYEAKER 405
            +A+  A++++    +PFD+         SIG   YP D + A  LL  AD AMY AK R
Sbjct: 367 TAAQACANKVLYAFAEPFDMEGLQLFAGTSIGIALYPDDADGAESLLSRADAAMYHAK-R 425

Query: 406 GRNRLIKFNDQMNKEARMRLWLEIELQKALQQNGLEVWYQPKVNARDFSINGAEALVRWK 465
           G      F+ +M+++   R+ LE +L+ AL ++   + YQPKV+A   +I GAEAL+RW+
Sbjct: 426 GGLPYSCFDIEMDRQVAERVSLENDLRLALGEDQFRLVYQPKVDALSGAIIGAEALIRWR 485

Query: 466 HPVEGYISPGAFIPVAEKAGLIEHLGRVVMREVFATVKRWKLQGILPGRVAINISPEQFG 525
           HPV   +SPG FIPVAE+AGLI  +   V+ E    V  W+ QG++   +++N+SP QF 
Sbjct: 486 HPVRADVSPGLFIPVAERAGLIGAIDDWVLVEACRQVAEWRAQGLILPSISVNLSPAQFH 545

Query: 526 NPQLIDYLEKLLRTTGLDPNNITFELTESAVMSDSEHTQQMLNAIKKLGFTLSIDDFGTG 585
           + +L + ++  L  +GL P+ +  E+TE+ + SD +   ++L  +  LG  +S+DDFGTG
Sbjct: 546 DGRLKEKVKAALAGSGLPPSVLELEITETMMASDVDRAIEILGQLTTLGVRVSLDDFGTG 605

Query: 586 YSSLAYLARFPIDELKIDRAFISNIDTLPKQLTVIENIINLGRSLNLTVVAEGVETQQQA 645
           YSSLAYL  FP+  LKIDRAF++ +    K   +I ++I L  +L  +V+AEGVET++QA
Sbjct: 606 YSSLAYLKLFPVSTLKIDRAFVTELPGNAKDGAIIASVIALAGNLGFSVIAEGVETREQA 665

Query: 646 TLLSNLNCHSIQGFHFYRP 664
             L+   C  +QGF F RP
Sbjct: 666 AFLAARGCPIMQGFLFSRP 684



 Score = 25.4 bits (54), Expect = 0.010
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 12/74 (16%)

Query: 127 RSLEESESKYALLTTLLPDGLMMVENDCIISANPSAARLLGFDDAQKLLG--ENLSR-LF 183
           RSL E+  +    TT  PDG  +        ANP+ AR+ G+ D  +L+    +++R L+
Sbjct: 24  RSLFENAVEGIYRTT--PDGRYL-------DANPALARIYGYKDPAELIAGLTDIARGLY 74

Query: 184 IDEKTKTVFSSQLA 197
           +D   +  F   LA
Sbjct: 75  VDPADRERFREILA 88