Pairwise Alignments

Query, 684 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 860 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Enterobacter asburiae PDN3

 Score =  303 bits (777), Expect = 2e-86
 Identities = 173/462 (37%), Positives = 268/462 (58%), Gaps = 14/462 (3%)

Query: 213 CGFERKIQLHAGCTSLLGNQSQ----LILLQDADEAPKQFSATTQVD--AHIDSLTGLYN 266
           C +    Q  + CT L    +Q    ++L   A +  ++  AT +V+  +  D LTGL N
Sbjct: 388 CPYTHAQQTTSYCTLLAKFSAQPDGTVVLRGAATDVSQEVEATKRVEFLSRHDELTGLPN 447

Query: 267 RHGFTK----RLEQCIQNETPLVMLYLDIDNFKNINDSLGHHIGDKVIKEVAARLKRLLP 322
           R+   +    +L +   N  P  M+ LD+D FK +ND  GH  GD ++ EVA+RLK  + 
Sbjct: 448 RYHIKEFLAGKLAKEDLNHYPFAMICLDLDKFKPVNDIFGHSTGDALLGEVASRLKNCVR 507

Query: 323 QQAVLGHLGGDEFGLILPEPEHNRSAEMLADRIISLINQPFDLHHFSKRLACSIGSVRYP 382
           +   +   GGDEF L+L         E +  RI+  +N+PF +      +  S+G    P
Sbjct: 508 RGDFVARQGGDEFMLLLGNTSQQDQIEEVCRRIVQELNRPFAIEGNDVAIGVSMGIALAP 567

Query: 383 GDGNDARVLLQNADTAMYEAKERGRNRLIKFNDQMNKEARMRLWLEIELQKALQQNGLEV 442
            D + A  LL+ AD A+Y+AK+ GRNR + +   M+++   R  LE+EL+ A+++  L +
Sbjct: 568 RDSSSANDLLRYADIALYQAKQSGRNRWVYYRPDMSEKLTERRKLELELKTAIREEQLYL 627

Query: 443 WYQPKVNARDFSINGAEALVRWKHPVEGYISPGAFIPVAEKAGLIEHLGRVVMREVFATV 502
            YQP+ N R  +I+  EALVRW+HP  G I P  FIP+AE+ GLI  L   V+R+  A  
Sbjct: 628 VYQPRYNLRYSTIDAVEALVRWQHPARGTIMPDQFIPLAEETGLIISLSNWVIRKACAET 687

Query: 503 KRWKLQGILPGRVAINISPEQFGNPQLIDYLEKLLRTTGLDPNNITFELTESAVMSDSEH 562
           K  KL G+    V++NIS  +F    L + ++++LR TGL+PN +  E+TE+  +SD E 
Sbjct: 688 KD-KLPGL---SVSVNISAIEFQASDLAERIKEILRETGLEPNRLEIEVTENVTLSDPEK 743

Query: 563 TQQMLNAIKKLGFTLSIDDFGTGYSSLAYLARFPIDELKIDRAFISNIDTLPKQLTVIEN 622
           T Q + ++KK+G  + IDDFGTGY+SL+YL +F  D LK+D++FI  +   P+  +V+E 
Sbjct: 744 TLQTMKSLKKMGVRILIDDFGTGYASLSYLRKFQFDGLKLDKSFIFTLGDSPQNQSVVEK 803

Query: 623 IINLGRSLNLTVVAEGVETQQQATLLSNLNCHSIQGFHFYRP 664
           II+LG++ ++ V AEGVET +Q + L    C  +QG+   +P
Sbjct: 804 IIDLGKAYSMAVTAEGVETAEQLSFLKKNKCDEVQGYLLGKP 845