Pairwise Alignments

Query, 337 a.a., protease from Vibrio cholerae E7946 ATCC 55056

Subject, 655 a.a., Probable collagenase (EC 3.4.24.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 91.3 bits (225), Expect = 6e-23
 Identities = 82/306 (26%), Positives = 132/306 (43%), Gaps = 48/306 (15%)

Query: 1   MELLCPAGNLPALKTAIDCGADAVYIG---FKDDTNARHFAGLNFSGKKLEKAVDYVHDH 57
           +ELL PA +      A++ GADA+YIG   F   T+A +        + + +   + H  
Sbjct: 6   IELLSPARDADIGIEAVNHGADAIYIGGPSFGARTSADNRV------QDIARLTRHAHRF 59

Query: 58  NKKIHIALNTFAHPNGFERWTNAVDQAADLGVDALIIADIAVLEYAARHYPHLELHLSVQ 117
             ++++ +NT    +  E       Q  D G DALII D+ +LE      P ++LH S Q
Sbjct: 60  GSRVYVTMNTILRDDELEGARKLAWQLYDAGADALIIQDMGLLEI---DLPPIQLHASTQ 116

Query: 118 ASATNVKAVEFYHQNFNVKRVVLPRVLSIHQVKQLSRNIP-QGVELEVFAFGSLCIMSEG 176
                 +   F  Q+  + ++VL R L++ Q+  +   +  +   +E F  G+LC+   G
Sbjct: 117 TDIRTPEKARFL-QDAGLSKLVLARELTLPQIAAIRDALDAERCLIEFFIHGALCVAYSG 175

Query: 177 RCYLSSYMTGESPNTVGACSPAKYVRWQETESGLESRLNEILIDKYAAGENAGYPTLCKG 236
           +CY+S   TG S N  G CS A  + ++  +S                          +G
Sbjct: 176 QCYVSHAHTGRSANR-GDCSQACRLPYEVKDS--------------------------QG 208

Query: 237 RFITDIEGERKCYHALEEPTSLNTLSLLPELFAANVASVKIEGRQRSPAYVEQVTRTWRA 296
           R +   +      H L    + N    L EL  A   S KIEGR +   YV+ +T  +R 
Sbjct: 209 RIVAHDK------HVLSMKDN-NQSDNLRELIEAGARSFKIEGRYKDMGYVKNITAHYRV 261

Query: 297 AIDRYL 302
             D+ L
Sbjct: 262 LFDQIL 267