Pairwise Alignments

Query, 337 a.a., protease from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., tRNA 5-hydroxyuridine modification protein YegQ from Serratia liquefaciens MT49

 Score =  134 bits (337), Expect = 4e-36
 Identities = 95/319 (29%), Positives = 152/319 (47%), Gaps = 26/319 (8%)

Query: 2   ELLCPAGNLPALKTAIDCGADAVYIGFKDDTNARHFAGLNFSGKKLEKAVDYVHDHNKKI 61
           ELL PAG L  ++ A   GADAVY G      +       F+ + L + ++  H   K+ 
Sbjct: 5   ELLSPAGTLKNMRYAFAYGADAVYAG--QPRYSLRVRNNEFNHENLAQGINEAHALGKRF 62

Query: 62  HIALNTFAHPNGFERWTNAVDQAADLGVDALIIADIAVLEYAARHYPHLELHLSVQASAT 121
           ++ +N   H    + +   +    D+G DALI++D  ++      +P +++HLSVQA+A 
Sbjct: 63  YVVVNIAPHNAKLKTFLRDLKPVIDMGPDALIMSDPGLIMMVREAFPQMDIHLSVQANAV 122

Query: 122 NVKAVEFYHQNFNVKRVVLPRVLSIHQVKQLSRNIPQGVELEVFAFGSLCIMSEGRCYLS 181
           N   V+F+ Q   + RV+L R LS+ ++ ++   +P+ +ELE+F  G+LC+   GRC LS
Sbjct: 123 NWATVKFW-QQMGLTRVILSRELSLEEIAEIRTQVPE-MELEIFVHGALCMAYSGRCLLS 180

Query: 182 SYMTGESPNTVGACSPAKYVRWQ-ETESGLESRLNEIL-------IDKYAAGENAGYPT- 232
            Y+    PN  G C+ A   RWQ + E G E     I+       +         G PT 
Sbjct: 181 GYINKRDPNQ-GTCTNA--CRWQYKAEEGKEDETGNIVHMHEPIPVQTVEPTLGIGAPTD 237

Query: 233 --------LCKGRFITDIEGERKCYHALEEPTSLNTLSLLPELFAANVASVKIEGRQRSP 284
                      G +++  E E   Y  +     L  +  +  L    V S+KIEGR +S 
Sbjct: 238 KVFMLSEAQKPGEYMSAFEDEHGTY--IMNSKDLRAIQHVERLTQLGVHSLKIEGRTKSF 295

Query: 285 AYVEQVTRTWRAAIDRYLA 303
            Y  +  + +R AID  +A
Sbjct: 296 YYCARTAQVYRRAIDDAVA 314