Pairwise Alignments

Query, 337 a.a., protease from Vibrio cholerae E7946 ATCC 55056

Subject, 458 a.a., tRNA 5-hydroxyuridine modification protein YegQ from Erwinia tracheiphila SCR3

 Score =  130 bits (328), Expect = 5e-35
 Identities = 93/316 (29%), Positives = 154/316 (48%), Gaps = 28/316 (8%)

Query: 2   ELLCPAGNLPALKTAIDCGADAVYIGF-KDDTNARHFAGLNFSGKKLEKAVDYVHDHNKK 60
           ELL PAG L  ++ A   GADAVY G  +    AR+     F+ + L   ++  H   KK
Sbjct: 5   ELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRARNN---EFNHENLATGINEAHALGKK 61

Query: 61  IHIALNTFAHPNGFERWTNAVDQAADLGVDALIIADIAVLEYAARHYPHLELHLSVQASA 120
            ++ +N   H    + +   +     +G DALI++D  ++      +P  ++HLSVQA+A
Sbjct: 62  FYVVVNIAPHNAKLKTFIRDLQPVVAMGPDALIMSDPGLIMMVRDTFPQTDIHLSVQANA 121

Query: 121 TNVKAVEFYHQNFNVKRVVLPRVLSIHQVKQLSRNIPQGVELEVFAFGSLCIMSEGRCYL 180
            N   V+F+ Q   + R +L R LS+ +++++ + +P  +ELE+F  G+LC+   GRC L
Sbjct: 122 VNWATVKFW-QKMGLTRAILSRELSLEEIEEIRQQVPD-MELEIFVHGALCMAYSGRCLL 179

Query: 181 SSYMTGESPNTVGACSPAKYVRWQ-ETESGLESRLNEILIDKYAAGENAGYPTLCKGR-- 237
           S Y+    PN  G C+ A   RW+ +   G +  L +I+    +       PTL +G+  
Sbjct: 180 SGYINKRDPNQ-GTCTNA--CRWEYKVLEGKQDELGQIVHQHQSIPVKTVEPTLGQGQPT 236

Query: 238 --------------FITDIEGERKCYHALEEPTSLNTLSLLPELFAANVASVKIEGRQRS 283
                         ++   E E   Y  +     L  ++ +  L A  + S+KIEGR +S
Sbjct: 237 DSMFLIEETMRPGEYMIAFEDEHGTY--IMNSKDLRAVAHVGRLSAMGIHSLKIEGRTKS 294

Query: 284 PAYVEQVTRTWRAAID 299
             Y  +  + +R AID
Sbjct: 295 HYYCARTAQVYRRAID 310