Pairwise Alignments

Query, 337 a.a., protease from Vibrio cholerae E7946 ATCC 55056

Subject, 458 a.a., tRNA 5-hydroxyuridine modification protein YegQ from Dickeya dadantii 3937

 Score =  131 bits (330), Expect = 3e-35
 Identities = 93/320 (29%), Positives = 153/320 (47%), Gaps = 31/320 (9%)

Query: 2   ELLCPAGNLPALKTAIDCGADAVYIGFKDDTNARHFAGLNFSGKKLEKAVDYVHDHNKKI 61
           ELL PAG L  ++ A   GADA+Y G      +       F+ + L +A+   H   KK 
Sbjct: 5   ELLSPAGTLKNMRYAFAYGADAIYAG--QPRYSLRVRNNEFNHQTLAQAISEAHALGKKF 62

Query: 62  HIALNTFAHPNGFERWTNAVDQAADLGVDALIIADIAVLEYAARHYPHLELHLSVQASAT 121
           ++ +N   H    + +   +    ++  DALI++D  ++     ++P + +HLSVQA+A 
Sbjct: 63  YVVVNIAPHNAKLKTFLRDLQPVVEMNPDALIMSDPGLIMLVRENFPQMPIHLSVQANAV 122

Query: 122 NVKAVEFYHQNFNVKRVVLPRVLSIHQVKQLSRNIPQGVELEVFAFGSLCIMSEGRCYLS 181
           N   V+F+ Q   + RV+L R LS+ ++ ++   +P+ +ELE+F  G+LC+   GRC LS
Sbjct: 123 NWATVKFWQQ-MGLSRVILSRELSLEEIAEIRAQVPE-MELEIFVHGALCMAYSGRCLLS 180

Query: 182 SYMTGESPNTVGACSPAKYVRWQ-ETESGLESRLNEIL-------IDKYAAGE-----NA 228
            Y+    PN  G C+ A   RW+   + G E  +  I+       + +  A +       
Sbjct: 181 GYINKRDPNQ-GTCTNA--CRWEYNVQEGKEDAVGNIVHIHEPIAVTQLDAAQVEPTLGI 237

Query: 229 GYPT---------LCKGRFITDIEGERKCYHALEEPTSLNTLSLLPELFAANVASVKIEG 279
           G PT            G +++  E E   Y  +     L  +  +  L    VAS+KIEG
Sbjct: 238 GAPTDKVFMLEEKQRPGEYMSAFEDEHGTY--IMNSRDLRAIQHVERLTTIQVASLKIEG 295

Query: 280 RQRSPAYVEQVTRTWRAAID 299
           R +S  Y  +  + +R AID
Sbjct: 296 RTKSFYYCARTAQVYRRAID 315