Pairwise Alignments

Query, 337 a.a., protease from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., 23S rRNA 5-hydroxycytidine synthase from Acinetobacter radioresistens SK82

 Score =  130 bits (326), Expect = 9e-35
 Identities = 95/320 (29%), Positives = 153/320 (47%), Gaps = 25/320 (7%)

Query: 2   ELLCPAGNLPALKTAIDCGADAVYIGFKDDTNARHFAGLNFSGKKLEKAVDYVHDHNKKI 61
           ELL PAG+L  ++ A   GADAVY G      +       F    L+  ++  H   KK 
Sbjct: 8   ELLSPAGSLKNMRYAFAYGADAVYAG--QPRYSLRVRNNEFDHDNLKTGIEEAHQLGKKF 65

Query: 62  HIALNTFAHPNGFERWTNAVDQAADLGVDALIIADIAVLEYAARHYPHLELHLSVQASAT 121
           ++ +N   H +  + +   +     +  DALI++D  ++  A  H+P + +HLSVQA+A 
Sbjct: 66  YVVVNIQPHNSKLKNFIRDLAPVVAMKPDALIMSDPGLIMMAREHFPDMPIHLSVQANAV 125

Query: 122 NVKAVEFYHQNFNVKRVVLPRVLSIHQVKQLSRNIPQGVELEVFAFGSLCIMSEGRCYLS 181
           N   V+F+ +   + RV+L R LS+ +++++ +N+P  +E+EVF  G+LC+   GRC LS
Sbjct: 126 NWATVKFW-KTMGLTRVILSRELSLEEIEEIKQNVPD-MEIEVFVHGALCMAYSGRCLLS 183

Query: 182 SYMTGESPNTVGACSPAKYVRWQ-------ETESGLESRLNEI---------LIDKYAAG 225
            YM     N  GAC+ A   RW+       E E+G    L ++         L  ++  G
Sbjct: 184 GYMNKRDANQ-GACTNA--CRWEYKIYNAIEDETGDIIALQDVPKGCCNKTELDQQHMLG 240

Query: 226 ENAGYPTLCKGRFITDIEGERKCYHA--LEEPTSLNTLSLLPELFAANVASVKIEGRQRS 283
           +      +       D+    +  H         L  +  +  L    V S+KIEGR +S
Sbjct: 241 QQQVKEPVLLQHNEEDMFAAEEDEHGTYFMNSKDLRAVQHVERLTKMGVHSLKIEGRTKS 300

Query: 284 PAYVEQVTRTWRAAIDRYLA 303
             Y  +  +T+R AID  LA
Sbjct: 301 YFYCARTAQTYRKAIDDALA 320