Pairwise Alignments

Query, 445 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 472 a.a., MATE efflux family protein from Variovorax sp. SCN45

 Score = 74.7 bits (182), Expect = 6e-18
 Identities = 98/443 (22%), Positives = 190/443 (42%), Gaps = 21/443 (4%)

Query: 4   RSIYRQFVRYTIPTVAAMLVNGLYQVVDGIFIGHYVGAEGLAGINVAWPVIGTILGIGML 63
           R +++ F+ +  P + + ++  L   ++ I++G  +G   LA ++  +PV+     I  +
Sbjct: 28  RPLWKVFLLFLAPMLLSNILQSLSGTLNNIYVGQMLGVGALAAVSSFFPVM--FFFIAFI 85

Query: 64  VGVGTGALASIKQGEGHPDS--AKRILATGLMSLLLLAPIVAVILWFMADDFLRWQGAEG 121
           +G+G GA   I Q  G  D+  AK +  T L   +L   ++AV         L   G   
Sbjct: 86  IGLGAGASVLIGQAWGARDAAKAKAVAGTTLTVGVLTGLVIAVFGGAFTTPMLASLGTPP 145

Query: 122 RVFELGLQYLQVLIVGCLFTLGSIAMPFLLR--NDHSPNLATLLM--VIGALTNIALDYL 177
            V     +Y +++++        +    +LR   D    L TL++  +IG +   AL   
Sbjct: 146 DVLADSTRYARIMLIAMPGLFVFLLATAMLRGVGDTVTPLLTLMISTLIGLVVTPALIRG 205

Query: 178 FIAWLQWELTGAAIATTLAQVVVTL-LG--LAYFFSARANMRLTRRCLRLEWHSLPKIFA 234
           +    Q  +   A A+ L+  V T+ LG  L    S  A      R LR++   L  +  
Sbjct: 206 WGGLPQLGVASGAWASVLSFTVATIWLGFRLRQRKSPLAPDAEFMRNLRIQPQLLKAVLK 265

Query: 235 IGVSSFFMYAYGSTMVALHNTLMIEYGNAVMVGAYAVMGYIVTIYYLTVEGIANGMQPLA 294
           IGV +       +    +  +++  YG++    AY  +  +V         IA     L 
Sbjct: 266 IGVPTGVQMIVVALAEVVLLSMVNSYGSSA-TAAYGAVNQVVAYVQFPAISIAITASILG 324

Query: 295 SYHFGARNYDHIRKLLR--LAMGIAVLGGMAFVLVLNLFPEQAIAIFNSSDSELIAGAQM 352
           +   GA   + +  + +  L M + + GG+  V++  LF    +A F +S+  ++  AQ 
Sbjct: 325 AQAIGAGRANRLGAIAKTALLMNVVLTGGL--VVLGYLFSRHLMAFFITSE-PVLEIAQT 381

Query: 353 GIKLHLFAMYLDGFL-VVSAAYYQSTNRGGKAMFITVGNMSIMLPFLFILPQFFGLTGVW 411
            + + L+++ + G    +S     S +     +   V  + + +P  + +    GL G+W
Sbjct: 382 LLHIMLWSLVIFGMASALSGIMRASGSVLVPTLISIVCILGVEVPVAYAMSHRLGLDGIW 441

Query: 412 IALPI---SNIVLSTVVGIMLWR 431
           IA P+   + ++L T    ++WR
Sbjct: 442 IAYPVTFGAMLLLQTAYYQLVWR 464