Pairwise Alignments

Query, 445 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., MATE efflux family protein from Pseudomonas putida KT2440

 Score = 75.1 bits (183), Expect = 4e-18
 Identities = 74/335 (22%), Positives = 142/335 (42%), Gaps = 26/335 (7%)

Query: 3   NRSIYRQFVRYTIPTVAAMLVNGLYQVVDGIFIGHYVGAEGLAGINVAWPVIGTILGIGM 62
           +R  +R+      P + + +   L  +VD   IGH   A  L  + V   +   ++G+  
Sbjct: 10  HRPTHRKVWALAAPMILSNISVPLVALVDSTVIGHLPHAHQLGAVAVGATLFTFMVGLMG 69

Query: 63  LVGVGTGALASIKQGEGHPDSAKRILATGLMSLLLLAPIVAVILWFMADDFLRWQGAEGR 122
            + +G+   A+   G G   + +++L  GL+  +  A ++ ++    +   L        
Sbjct: 70  FLRMGSTGFAAQAAGRGDGAALRQVLVQGLLLAVGFALLIGLLALPFSQLALHAMQPSAA 129

Query: 123 VFELGLQYLQVLIVGCLFTLGSIAMPFLLRNDHSPNLATLLMVIGALTNIALDYLFIAWL 182
           + +    +    ++G    L S A+        +      +++   L NIAL+  F+  L
Sbjct: 130 LQQSTEDFFHTRLLGLPAALASYALVGWFLGTQNARAPLAILLTTNLLNIALNLWFVLGL 189

Query: 183 QWELTGAAIATTLAQVVVTLLGLAYFFSARANMRLTRRCLRL-----------EWHSLPK 231
            W + G+A A+ +A+    LLGLA          LTR  LR             W +   
Sbjct: 190 DWGVLGSARASVIAEWSAALLGLA----------LTRPALRAYPGQIVWAALKRWQAWRP 239

Query: 232 IFAIGVSSFFMYAYGSTMVALHNTLM-IEYGNA-VMVGAYAVMGYIVTIYYLTVEGIANG 289
           + A+     F+ +    +V L  T+     G A V   A  + G ++T Y L  +G+A+ 
Sbjct: 240 LLAVN-RDIFLRSLALQLVFLLITVQGARLGEATVAANALLLNGLLLTAYAL--DGLAHA 296

Query: 290 MQPLASYHFGARNYDHIRKLLRLAMGIAVLGGMAF 324
           ++ L  +  GAR+ D +R+ L +A G +++  + F
Sbjct: 297 VEALCGHAIGARDRDTLRRSLVVACGWSLITSLGF 331