Pairwise Alignments

Query, 445 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 451 a.a., MATE family efflux transporter from Pseudomonas fluorescens SBW25

 Score = 81.6 bits (200), Expect = 5e-20
 Identities = 99/448 (22%), Positives = 190/448 (42%), Gaps = 27/448 (6%)

Query: 2   MNRSIYRQFVRYTIPTVAAMLVNGLYQVVDGIFIGHYVGAEGLAGINVAWPVIGTILGIG 61
           + R +++ ++ +  P V +  +      ++GI++G  +G + LA ++  +P++     I 
Sbjct: 5   LQRPLWQIYLIFLAPMVLSNFLQSFSGTLNGIYVGQMLGTQALAAVSGMFPIV--FFFIA 62

Query: 62  MLVGVGTGALASIKQGEGHPDSA--KRILATGLMSLLLLAPIVAVILWFMADDFLRWQGA 119
           +++G+G GA   I Q  G  ++A  K I    L    L+  I AV+    A   L+  G 
Sbjct: 63  LVIGLGAGASVLIGQAWGAQETAMVKAITGATLTLGALVGVIAAVLGSLFARPALQALGT 122

Query: 120 EGRVFELGLQYLQVLIVGCLFTLGSIAMPFLLRNDHSPNLATLLMVIGALTNIALDYLFI 179
              V +  + Y Q +++     L  I    LLR         L +++  L  + L    I
Sbjct: 123 PVDVLDDAVGYAQKMMLIMPLLLVFILYTQLLRGVSDTISPLLALMVSTLVGLLLTPALI 182

Query: 180 -AW-------LQWELTGAAIATTLAQVVVTLLGLAYFFSARANMRLTRRCLRLEWHSLPK 231
             W       +Q  +    +   LA + + +L L +     A  R     LRL+   L K
Sbjct: 183 RGWVGLPPLGIQSAVYAGLVGNALAMLFL-ILRLRHKNHVMAPDRELLAALRLDRVILGK 241

Query: 232 IFAIGVSSFFMYAYGSTMVALHNTLMIEYGNAVMVGAYAVMGYIVTIYYLTVEGIANGMQ 291
           +  IG+ +       S    +   L+  +G+     AY  +  IV         IA    
Sbjct: 242 VLRIGLPTGLQMVVLSLSELVILALVNGHGSQA-TAAYGAVTQIVNYVQFPALSIAITAS 300

Query: 292 PLASYHFGARNYDHIRKLLR--LAMGIAVLGGMAFVLVLNLFPEQAIAIFNSSDSELIAG 349
            L +   GA   + I  +LR  L +   + GG+  +++  +     + +F + D+  +  
Sbjct: 301 ILGAQAIGAGRLERIGPILRTGLLINTCLTGGL--IVLGYVLSHWLLGLFITDDAARV-N 357

Query: 350 AQMGIKLHLFAMYLDGFLVVSAAYYQSTNRGGKAMFITVGNMSIM---LPFLFILPQFFG 406
           A+  + + L+++ + GF  V     +++  G   M + +    ++   LP  ++L   FG
Sbjct: 358 AEHLLHIMLWSILVFGFQAVIGGIMRAS--GVVLMPVVISIFCVLCVELPMAYLLNAHFG 415

Query: 407 LTGVWIALPI---SNIVLSTVVGIMLWR 431
           L GVW+A P+   + +VL T    ++WR
Sbjct: 416 LEGVWMAFPVTYLAMLVLQTAYYRLVWR 443