Pairwise Alignments

Query, 445 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 479 a.a., MATE family efflux transporter from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 94.4 bits (233), Expect = 7e-24
 Identities = 101/422 (23%), Positives = 185/422 (43%), Gaps = 29/422 (6%)

Query: 22  LVNGLYQVVDGIFIGHYVGAEGLA---GINVAWPVIGTILGIGMLVGVGTGALASIKQGE 78
           +V   +Q   G    ++V   GLA    I     ++     + M +GV      +   G 
Sbjct: 31  VVENFFQTFIGFVDVYFVSKIGLAEVSAIGATNAILAIYFAVFMAIGVAANVRVANALGA 90

Query: 79  GHPDSAKRILATGLMSLLLLAPIVAVILWFMADDFLRWQGAEGRVFELGLQYLQVLIVGC 138
              + A+ I    ++  +L   +  ++  F A   L   G E +V ++G  Y +V+ +  
Sbjct: 91  KQVERARHIAQQAIILSILFGILTGIVTLFFARPLLTLMGLEEQVLDIGENYFRVVGIPS 150

Query: 139 LFTLGSIAMPFLLR---NDHSP-NLATLLMVIGALTNIALDYLFIAWLQWELTGAAIATT 194
           +F     A+   LR   N  +P  ++ ++ +  AL   AL + F  + +  +TGAA+AT 
Sbjct: 151 VFMSLMFALSANLRGSGNTRAPMKVSIIINIFHALLGYALIFGFWIFPEMGVTGAALATV 210

Query: 195 LAQVVVTLLGLAYFFSARANMRLTRRCLRLEWHSLPKIFAIGVSSFFMYAYGSTMVALHN 254
            ++V+ TLL L Y+      +   +    ++W    ++  +G       A G  ++ +  
Sbjct: 211 ASRVLGTLL-LVYYIQRSEVLAFRKDFWSVDWGHQKELATLGSP-----AAGEVLI-MRA 263

Query: 255 TLMIEYGNAVMVG-----AYAVMGYIVTIYYLTVEGIANGMQPLASYHFGARNYDHIRKL 309
             ++ +G  V +G     A+ + G +  I Y+   G A  +  LA    GA   +     
Sbjct: 264 GQIVYFGFIVSLGTNVFAAHQIAGNVEVISYMAGYGFATAVTILAGQQIGAGRIEEAVSF 323

Query: 310 LRLAMGIAVLGGMAFVLVLNLF--PEQAIAIFNSSDSELIAGAQMGIKLH-LFAMYLDGF 366
            ++   +AV  G+  VL L LF   E A ++F S D E+I+     +K+   F  +L   
Sbjct: 324 TKIGAWMAV--GIMGVLGLLLFFLGEWAGSLF-SQDPEVISKIGNALKVSGAFQPFLAAL 380

Query: 367 LVVSAAYYQSTNRGGKAMFITVGNM---SIMLPFLFILPQFFGLTGVWIALPISNIVLST 423
           L ++ A YQ+ N     M++T   M     +L +   +   +GLTGVWIA+ I  +  + 
Sbjct: 381 LTLTGA-YQAANNTKFPMYLTAAGMWAIRTVLVYYLGITLGWGLTGVWIAIGIDIVTRAG 439

Query: 424 VV 425
           V+
Sbjct: 440 VL 441



 Score = 26.9 bits (58), Expect = 0.001
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 11/68 (16%)

Query: 16  PTVAAML-VNGLYQVVDGIFIGHYVGAEGL----------AGINVAWPVIGTILGIGMLV 64
           P +AA+L + G YQ  +      Y+ A G+           GI + W + G  + IG+ +
Sbjct: 375 PFLAALLTLTGAYQAANNTKFPMYLTAAGMWAIRTVLVYYLGITLGWGLTGVWIAIGIDI 434

Query: 65  GVGTGALA 72
               G LA
Sbjct: 435 VTRAGVLA 442