Pairwise Alignments

Query, 709 a.a., polyribonucleotide nucleotidyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 701 a.a., polynucleotide phosphorylase/polyadenylase from Pseudomonas simiae WCS417

 Score =  842 bits (2175), Expect = 0.0
 Identities = 441/703 (62%), Positives = 536/703 (76%), Gaps = 8/703 (1%)

Query: 5   PVVKTFQYGNHTVTLETGVMARQATAAVMATMDD-TAVFVSVVGKKEAVVGQDFFPLTVN 63
           PV+K FQ+G  TVTLETG +ARQA+ AV+ T+DD   V V+VVG K A   + FFPL+V+
Sbjct: 3   PVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVTVLVTVVGAKTADPSKGFFPLSVH 62

Query: 64  YQERTYAAGKIPGGFFKREGRPSEGETLIARLIDRPIRPLFPDGFTNEVQVIATVVSVNP 123
           YQE+TYAAGKIPGGFFKREGRPSE ETL +RLIDRPIRPLFP+GF NEVQV+ TVVS + 
Sbjct: 63  YQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVSTSK 122

Query: 124 DVQPDIISMIGTSAALAISGLPFNGPIGAARVG-HIDGQLVLNPSEKELKQSRLDLVVAG 182
              PDI +MIGTSAALAISG+PF+GPIGAARV  H     +LNP+ ++ K S LD+VVAG
Sbjct: 123 KTDPDIAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQQKASSLDMVVAG 182

Query: 183 TDNAVLMVESEAQILTEEEMLAAVVFGHDQQQAVIKAINEFAAEVATPAWEWVAPAENTE 242
           T  AVLMVESEA+ LTE++ML AV+F HD+ QAVIKA+ E AAE A P W W   AE TE
Sbjct: 183 TSEAVLMVESEAKELTEDQMLGAVLFAHDEFQAVIKAVTELAAEAAKPTWTWAPQAEATE 242

Query: 243 LKAKVAALAETRLVEAYQITEKMARYDRIHEISAEVTAALLAENEALDTKEIHTIFHDLE 302
           L   + +     + +AY IT K  RY R+ E+  +V A L  E       ++   F ++E
Sbjct: 243 LLGAIRSEFGAAISDAYTITVKADRYARLGELKDQVVAKLSGEEGQPSASDVKAAFGEIE 302

Query: 303 KTVVRRSIIAGNPRIDGREKDMVRALDVRTGVLPRTHGSALFTRGETQALVTATLGTQRD 362
              VR +I+ G PRIDGR+   VR L++  GVLP+THGSALFTRGETQALV ATLGT RD
Sbjct: 303 YRTVRENIVNGKPRIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTARD 362

Query: 363 AQIIDELTGEKKDHFLLHYNFPPYCVGETGFVGSPKRREIGHGRLAKRGIAAVMPSPEEF 422
           AQ++D L GEKKD F+LHYNFPP+ VGE G +G   RREIGHGRLA+R IAA++P+ + F
Sbjct: 363 AQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSIAAMLPAADVF 422

Query: 423 PYTVRVVSEITESNGSSSMASVCGSSLALMDAGVPIKASVAGIAMGLVKEENDFVVLSDI 482
           PYT+RVVSEITESNGSSSMASVCG+SLALMDAGVP+KA VAGIAMGLVKE   F +L+DI
Sbjct: 423 PYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAILTDI 482

Query: 483 LGDEDHLGDMDFKVAGTATGVTALQMDIKIEGITKEIMQIALNQAKGARLHILSVMDQAI 542
           LGDEDHLGDMDFKVAGTA GVTALQMDIKI+GIT+EIM+IAL QA  ARL+IL  M+Q I
Sbjct: 483 LGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQII 542

Query: 543 SAARSDISEFAPRIHTMKISVEKIKDVIGKGGAVIRQLTEETGTTIEIEDDGTIKIAATD 602
             +R+++SE AP +  MKI  +KI+DVIGKGGA IR + EET  +I+IEDDG+IKI    
Sbjct: 543 GQSRTELSENAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFGET 602

Query: 603 GDQAKEAIRRIQEITAEVEVGVIYTGKVARLADFGAFVTILPGKDGLVHISQIADKRVEK 662
            + A+ A +R+  ITAE E+G IY GKV R+ DFGAFV ILPGKDGLVHIS ++D RVEK
Sbjct: 603 KEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARVEK 662

Query: 663 VSDYLTEGQEVQVKVLEIDRQGRVRLSMKEAVETSDAAAAEVA 705
           V+D L EGQEV+V VL++D +GR++LS+K      D AAA+ +
Sbjct: 663 VTDILKEGQEVEVLVLDVDNRGRIKLSIK------DVAAAKAS 699