Pairwise Alignments

Query, 709 a.a., polyribonucleotide nucleotidyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 791 a.a., Transcription accessory protein (S1 RNA-binding domain) from Variovorax sp. SCN45

 Score = 59.7 bits (143), Expect = 5e-13
 Identities = 32/75 (42%), Positives = 50/75 (66%), Gaps = 1/75 (1%)

Query: 618 AEVEVGVIYTGKVARLADFGAFVTILPGKDGLVHISQIADKRVEKVSDYLTEGQEVQVKV 677
           A+++ G+I  G V+ +A FGAFV +   +DGLVH+SQ++ K V    + +  G  V+VKV
Sbjct: 666 ADLKEGMILEGTVSNVAQFGAFVDLGVHQDGLVHVSQLSHKFVNDAREVVKTGDIVKVKV 725

Query: 678 LEID-RQGRVRLSMK 691
           +E+D  + R+ LSMK
Sbjct: 726 MEVDVARKRIGLSMK 740



 Score = 32.7 bits (73), Expect = 7e-05
 Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 3/86 (3%)

Query: 613 IQEITAEVEVGVIYTGKVARLADFGAFVTILP--GKDGLVHISQIADKRVEKVSDYLTEG 670
           I+++ AE++VG         L D GA V  +    K+    +     + +E    YL E 
Sbjct: 5   IRQLAAEIKVGENQVKAAVELLDGGATVPFIARYRKEATDGLDDTQLRELEARLSYLREL 64

Query: 671 QEVQVKVLE-IDRQGRVRLSMKEAVE 695
           ++ +V VL+ ID QG++   ++ A+E
Sbjct: 65  EDRRVAVLKAIDEQGKLTPELRAAIE 90