Pairwise Alignments

Query, 709 a.a., polyribonucleotide nucleotidyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 627 a.a., 30S ribosomal protein S1 from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 67.8 bits (164), Expect = 2e-15
 Identities = 38/114 (33%), Positives = 68/114 (59%), Gaps = 11/114 (9%)

Query: 593 DGTIKIAATDGDQAKEAIRR-IQEIT--------AEVEVGVIYTGKVARLADFGAFVTIL 643
           D  + I   D D+ K+ I   ++++T        AE+EVG    GK+  +AD+GAF+ ++
Sbjct: 258 DQKVNIVVLDFDEDKKRISLGMKQLTPHPWDALPAEIEVGSRVKGKIVNVADYGAFLELM 317

Query: 644 PGKDGLVHISQIA-DKRVEKVSDYLTEGQEVQVKVLEIDRQGR-VRLSMKEAVE 695
           PG +GL+H+S+++  + +    D++ +G EV+  VL +DRQ R + L +K+  E
Sbjct: 318 PGVEGLIHVSEMSWSQHLRNPQDFIKQGDEVEAVVLTLDRQERKMSLGIKQLTE 371



 Score = 51.2 bits (121), Expect = 2e-10
 Identities = 24/73 (32%), Positives = 45/73 (61%), Gaps = 1/73 (1%)

Query: 614 QEITAEVEVGVIYTGKVARLADFGAFVTILPGKDGLVHISQIA-DKRVEKVSDYLTEGQE 672
           +++  +  +G  +TG V  L +FG F+ +  G DGLVH+S ++  K+++  S+++  G+ 
Sbjct: 377 EDVLTKYAIGTKHTGIVRNLTNFGLFLELEEGVDGLVHVSDLSWTKKIKHPSEFVKVGEN 436

Query: 673 VQVKVLEIDRQGR 685
           + V VLE+D   R
Sbjct: 437 LDVVVLELDVPNR 449



 Score = 45.8 bits (107), Expect = 6e-09
 Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 3/91 (3%)

Query: 616 ITAEVEVGVIYTGKVARLADFGAFVTILPGKDGLVHISQIADKRVEKVSDYLTEGQEVQV 675
           I   +E G +  G +  + +FG F+  L G DGL+HI+ I+  R+    + L   Q+V +
Sbjct: 205 ILNNLEKGQVLEGVIKNMTNFGVFID-LGGVDGLLHITDISWGRINHPEEVLQLDQKVNI 263

Query: 676 KVLEIDR-QGRVRLSMKEAV-ETSDAAAAEV 704
            VL+ D  + R+ L MK+      DA  AE+
Sbjct: 264 VVLDFDEDKKRISLGMKQLTPHPWDALPAEI 294