Pairwise Alignments

Query, 709 a.a., polyribonucleotide nucleotidyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 557 a.a., 30S ribosomal protein S1 from Acinetobacter radioresistens SK82

 Score = 64.7 bits (156), Expect = 1e-14
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 2/83 (2%)

Query: 614 QEITAEVEVGVIYTGKVARLADFGAFVTILPGKDGLVHISQIADKRVEKVSDYLTEGQEV 673
           + + A++E G   TG +  L D+GAFV  L G DGL+HI+ +A KR++  S+ +  GQEV
Sbjct: 183 EALLAQLEEGQTVTGTIKNLTDYGAFVD-LGGIDGLLHITDMAWKRIKHPSEVVEVGQEV 241

Query: 674 QVKVLEIDRQ-GRVRLSMKEAVE 695
            VKVL+ DR+  RV L +K+  E
Sbjct: 242 TVKVLKFDRERNRVSLGLKQLGE 264



 Score = 46.6 bits (109), Expect = 3e-09
 Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 11/115 (9%)

Query: 588 IEIEDDGTIKIAATDGDQAKEAIRRIQ-------EITAEVEVGVIYTGKVARLADFGAFV 640
           +E+  + T+K+   D ++ + ++   Q        I      G I   +V  L D+G F 
Sbjct: 235 VEVGQEVTVKVLKFDRERNRVSLGLKQLGEDPWMAIMNRYPKGSIVKARVTNLTDYGCFA 294

Query: 641 TILPGKDGLVHISQI--ADKRVEKVSDYLTEGQEVQVKVLEIDRQ-GRVRLSMKE 692
            I  G +GLVH+S++   +K +   S  +  G EV V VLE+D +  R+ L +K+
Sbjct: 295 EIAEGVEGLVHVSEMDHTNKNIHP-SKVVQIGDEVDVMVLEVDEERRRISLGIKQ 348



 Score = 43.5 bits (101), Expect = 3e-08
 Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 2/81 (2%)

Query: 614 QEITAEVEVGVIYTGKVARLADFGAFVTILPGKDGLVHISQIA-DKRVEKVSDYLTEGQE 672
           +E     + G   +G +  + DFG F+ +  G DGLVH+S I+ +++ E+      +G  
Sbjct: 355 EEFAKNHDKGEKVSGTIKSITDFGIFIGLPGGIDGLVHLSDISWNEQGEEAIRRYKKGDT 414

Query: 673 VQVKVLEIDRQG-RVRLSMKE 692
           V+  +L +D +G R+ L +K+
Sbjct: 415 VEAVILSVDAEGNRISLGIKQ 435



 Score = 43.5 bits (101), Expect = 3e-08
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 1/88 (1%)

Query: 615 EITAEVEVGVIYTGKVARLADFGAFVTILPGKDGLVHISQIADKRVEKVSDYLTEGQEVQ 674
           +  A  E G +  G V  +   GA V +    +  +  S+I   RVE  + +L  GQEV+
Sbjct: 443 DFLAANERGALVKGTVTAVDARGATVKLADEVEATLKASEINRDRVEDATKFLEVGQEVE 502

Query: 675 VKVLEIDRQGR-VRLSMKEAVETSDAAA 701
            K++ +DR+ R + LS+K   E  +  A
Sbjct: 503 AKIINVDRKSRSINLSIKAKDEAEEKEA 530



 Score = 30.8 bits (68), Expect = 2e-04
 Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 12/133 (9%)

Query: 580 LTEETGTTIEIEDDGTIKIAATDGDQAKEAIRRIQEITAEV--------EVGVIYTGKVA 631
           L ++    +++ D   + + A D    +  + R +   AE         E G I TG ++
Sbjct: 54  LNDQRELEVQVGDTVDVVVEALDNGMGQTVLSREKAKRAETWTKLEKIFEDGEIVTGVIS 113

Query: 632 RLADFGAFVTILPGKDGLVHISQIADKRVEKVSDYLTEGQEVQVKVLEID-RQGRVRLSM 690
                G  V I P +  L     + D R  + + +L EG+E++ KV+++D ++  V +S 
Sbjct: 114 GKVKGGFTVDIGPVRAFLP--GSLVDTRPIRDTTHL-EGKELEFKVIKLDAKRNNVVVSR 170

Query: 691 KEAVETSDAAAAE 703
           +  +E   +A  E
Sbjct: 171 RAVMEAESSADRE 183