Pairwise Alignments

Query, 312 a.a., tRNA pseudouridine(55) synthase TruB from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., tRNA pseudouridine(55) synthase TruB from Rhodanobacter sp000427505 FW510-R12

 Score =  231 bits (590), Expect = 1e-65
 Identities = 134/295 (45%), Positives = 176/295 (59%), Gaps = 9/295 (3%)

Query: 8   RVIHGVILLDKPTGISSNDALQKVKRLYGAEKAGHTGALDPLATGMLPICLGEATKFSQF 67
           R +HG++LLDKP G+SSN ALQ V+RL  A K GHTGALDPLATG+LP+C GEATK +  
Sbjct: 10  RDLHGIVLLDKPPGLSSNQALQAVRRLLRASKGGHTGALDPLATGLLPLCFGEATKLAGS 69

Query: 68  LLDSDKRYRVIAKLGERTDTSDSDGQVVQTRPV-HVDYDTLLACIAKFRGETDQVPSMFS 126
           LL + K Y    +LG  TDT+DS+G+VVQ RPV  +D   + A +A+ RG   QVP M+S
Sbjct: 70  LLGARKAYLAECRLGVTTDTADSEGEVVQQRPVPELDDARVEAALARLRGRIQQVPPMYS 129

Query: 127 ALKYQGRPLYEYARQGIEVPREARKITVYEIELHRFEGDEVEMEVHCSKGTYIRTIVDDL 186
           ALK  G  LY  AR+G  V    R++ V+ +EL   EGD +++ V C  GTY+R++  DL
Sbjct: 130 ALKQGGERLYAKARRGETVELAPREVAVHRLELLAREGDTLQLLVECGSGTYVRSLAVDL 189

Query: 187 GEMLGCGAHVTMLRRVGVANYPYERMVTLEQLNALVEQAHRDEKAVADVLDPLLLPMDTA 246
           GE LGCGAH+T LRR+ V  +   RMVTL QL    EQ   DE  +A      LLP+   
Sbjct: 190 GEDLGCGAHLTALRRIWVEPFREPRMVTLTQLEQAAEQG--DEALLA-----WLLPVSAG 242

Query: 247 VEALPEVNVIPELMTLIQHGQAVQVSGAPSDGMVRITGGEQKLFLGVGEIDDNGK 301
           +  LP + +       I  GQ + + G P  G       +  L L + E D  G+
Sbjct: 243 LSDLPVLRLDETQSMAISRGQQIALPGLPEVGHCAAYASDGAL-LALLEADAEGR 296