Pairwise Alignments

Query, 312 a.a., tRNA pseudouridine(55) synthase TruB from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., tRNA pseudouridine(55) synthase TruB from Pectobacterium carotovorum WPP14

 Score =  421 bits (1082), Expect = e-122
 Identities = 207/306 (67%), Positives = 250/306 (81%)

Query: 4   RRKGRVIHGVILLDKPTGISSNDALQKVKRLYGAEKAGHTGALDPLATGMLPICLGEATK 63
           RR+GR IHGV+LLDKP G+SSND LQKVKR++ A +AGHTGALDPLATGMLPICLGEATK
Sbjct: 5   RRRGRDIHGVLLLDKPQGVSSNDVLQKVKRIFNANRAGHTGALDPLATGMLPICLGEATK 64

Query: 64  FSQFLLDSDKRYRVIAKLGERTDTSDSDGQVVQTRPVHVDYDTLLACIAKFRGETDQVPS 123
           FSQ+LLDSDKRYRVIA+LG+RTDTSD+DG V++ R +      L   +  FRG T QVPS
Sbjct: 65  FSQYLLDSDKRYRVIARLGQRTDTSDADGNVIEERAIGFSATELEQALEGFRGTTQQVPS 124

Query: 124 MFSALKYQGRPLYEYARQGIEVPREARKITVYEIELHRFEGDEVEMEVHCSKGTYIRTIV 183
           M+SALKYQGR LYEYARQG+ VPREAR+ITVYE++  R+EGDE+E+E+HCSKGTYIRTI+
Sbjct: 125 MYSALKYQGRKLYEYARQGLTVPREAREITVYELQFIRWEGDELELEIHCSKGTYIRTII 184

Query: 184 DDLGEMLGCGAHVTMLRRVGVANYPYERMVTLEQLNALVEQAHRDEKAVADVLDPLLLPM 243
           DDLGE LGCGAHV  LRR+ VA YP ERMVTLEQL AL EQA   E  ++  LDPLL+PM
Sbjct: 185 DDLGEKLGCGAHVIYLRRLQVATYPTERMVTLEQLAALAEQAQTQELPLSQSLDPLLMPM 244

Query: 244 DTAVEALPEVNVIPELMTLIQHGQAVQVSGAPSDGMVRITGGEQKLFLGVGEIDDNGKVA 303
           ++ V   PEVN+ P +   ++ GQAVQ + APS+GMVRIT G++  F+G+GEID +G+VA
Sbjct: 245 ESPVIDFPEVNLTPVVAGYLKLGQAVQAANAPSNGMVRITEGDEHKFIGMGEIDSDGRVA 304

Query: 304 PKRLVV 309
           P+RLVV
Sbjct: 305 PRRLVV 310